Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 MET14YKL001C 609 nt0.8□□□□□ -2.28
LSM6Q06406 RRT15YLR162W-A 189 nt0.8□□□□□ -2.28
LSM6Q06406 GRE2YOL151W 1029 nt0.8□□□□□ -2.28
LSM6Q06406 YCL001W-AYCL001W-A 462 nt0.8□□□□□ -2.28
LSM6Q06406 MDM20YOL076W 2391 nt0.8□□□□□ -2.28
LSM6Q06406 FUS2YMR232W 2034 nt0.8□□□□□ -2.28
LSM6Q06406 SST2YLR452C 2097 nt0.8□□□□□ -2.28
LSM6Q06406 ASG1YIL130W 2895 nt0.8□□□□□ -2.28
LSM6Q06406 CRM1YGR218W 3255 nt0.8□□□□□ -2.28
LSM6Q06406 NAN1YPL126W 2691 nt0.8□□□□□ -2.28
LSM6Q06406 SAC3YDR159W 3906 nt0.8□□□□□ -2.28
LSM6Q06406 LAA1YJL207C 6045 nt0.79□□□□□ -2.28
LSM6Q06406 YLR422WYLR422W 5799 nt0.79□□□□□ -2.28
LSM6Q06406 KEI1YDR367W 666 nt0.79□□□□□ -2.28
LSM6Q06406 YGL024WYGL024W 336 nt0.79□□□□□ -2.28
LSM6Q06406 YGL039WYGL039W 1047 nt0.79□□□□□ -2.28
LSM6Q06406 CUP9YPL177C 921 nt0.79□□□□□ -2.28
LSM6Q06406 YNL034WYNL034W 1839 nt0.79□□□□□ -2.28
LSM6Q06406 YSW1YBR148W 1830 nt0.79□□□□□ -2.28
LSM6Q06406 GRR1YJR090C 3456 nt0.79□□□□□ -2.28
LSM6Q06406 UBP11YKR098C 2154 nt0.79□□□□□ -2.28
LSM6Q06406 AI4Q0065 1671 nt0.78□□□□□ -2.28
LSM6Q06406 EST2YLR318W 2655 nt0.78□□□□□ -2.28
LSM6Q06406 YHR022CYHR022C 771 nt0.78□□□□□ -2.28
LSM6Q06406 PEX15YOL044W 1152 nt0.78□□□□□ -2.28
LSM6Q06406 PEX27YOR193W 1131 nt0.78□□□□□ -2.28
LSM6Q06406 NOP53YPL146C 1368 nt0.78□□□□□ -2.28
LSM6Q06406 SEY1YOR165W 2331 nt0.78□□□□□ -2.28
LSM6Q06406 NST1YNL091W 3723 nt0.78□□□□□ -2.29
LSM6Q06406 MSS11YMR164C 2277 nt0.77□□□□□ -2.29
LSM6Q06406 YCR015CYCR015C 954 nt0.77□□□□□ -2.29
LSM6Q06406 YDR133CYDR133C 336 nt0.77□□□□□ -2.29
LSM6Q06406 BNA7YDR428C 786 nt0.77□□□□□ -2.29
LSM6Q06406 YGL063C-AYGL063C-A 150 nt0.77□□□□□ -2.29
LSM6Q06406 EMT1tM(CAU)D 73 nt0.77□□□□□ -2.29
LSM6Q06406 EMT5tM(CAU)J1 73 nt0.77□□□□□ -2.29
LSM6Q06406 EMT3tM(CAU)J2 73 nt0.77□□□□□ -2.29
LSM6Q06406 EMT4tM(CAU)M 73 nt0.77□□□□□ -2.29
LSM6Q06406 EMT2tM(CAU)O2 73 nt0.77□□□□□ -2.29
LSM6Q06406 PDP3YLR455W 915 nt0.77□□□□□ -2.29
LSM6Q06406 YNL114CYNL114C 372 nt0.77□□□□□ -2.29
LSM6Q06406 CDC31YOR257W 486 nt0.77□□□□□ -2.29
LSM6Q06406 ADF1YCL058W-A 342 nt0.77□□□□□ -2.29
LSM6Q06406 PEX8YGR077C 1770 nt0.77□□□□□ -2.29
LSM6Q06406 TRZ1YKR079C 2517 nt0.77□□□□□ -2.29
LSM6Q06406 SMC1YFL008W 3678 nt0.77□□□□□ -2.29
LSM6Q06406 BEM2YER155C 6504 nt0.76□□□□□ -2.29
LSM6Q06406 YDR042CYDR042C 603 nt0.76□□□□□ -2.29
LSM6Q06406 YDR286CYDR286C 345 nt0.76□□□□□ -2.29
LSM6Q06406 YDR336WYDR336W 945 nt0.76□□□□□ -2.29
LSM6Q06406 MTC7YEL033W 420 nt0.76□□□□□ -2.29
LSM6Q06406 MSL1YIR009W 336 nt0.76□□□□□ -2.29
LSM6Q06406 IRC19YLL033W 693 nt0.76□□□□□ -2.29
LSM6Q06406 YHC1YLR298C 696 nt0.76□□□□□ -2.29
LSM6Q06406 RIF2YLR453C 1188 nt0.76□□□□□ -2.29
LSM6Q06406 YMR147WYMR147W 672 nt0.76□□□□□ -2.29
LSM6Q06406 YOR152CYOR152C 771 nt0.76□□□□□ -2.29
LSM6Q06406 NCA2YPR155C 1851 nt0.75□□□□□ -2.29
LSM6Q06406 SPO22YIL073C 2928 nt0.75□□□□□ -2.29
LSM6Q06406 SPE1YKL184W 1401 nt0.75□□□□□ -2.29
LSM6Q06406 YDR461C-AYDR461C-A 243 nt0.75□□□□□ -2.29
LSM6Q06406 VOA1YGR106C 798 nt0.75□□□□□ -2.29
LSM6Q06406 YGR204C-AYGR204C-A 114 nt0.75□□□□□ -2.29
LSM6Q06406 SRP21YKL122C 504 nt0.75□□□□□ -2.29
LSM6Q06406 VMR1YHL035C 4779 nt0.74□□□□□ -2.29
LSM6Q06406 SPO75YLL005C 2607 nt0.74□□□□□ -2.29
LSM6Q06406 SCC2YDR180W 4482 nt0.74□□□□□ -2.29
LSM6Q06406 MVB12YGR206W 306 nt0.74□□□□□ -2.29
LSM6Q06406 YBL096CYBL096C 309 nt0.74□□□□□ -2.29
LSM6Q06406 MEI5YPL121C 669 nt0.74□□□□□ -2.29
LSM6Q06406 RPB5YBR154C 648 nt0.74□□□□□ -2.29
LSM6Q06406 ALK1YGL021W 2283 nt0.74□□□□□ -2.29
LSM6Q06406 IRE1YHR079C 3348 nt0.74□□□□□ -2.29
LSM6Q06406 SPC72YAL047C 1869 nt0.73□□□□□ -2.29
LSM6Q06406 MMS22YLR320W 4365 nt0.73□□□□□ -2.29
LSM6Q06406 AHC2YCR082W 387 nt0.73□□□□□ -2.29
LSM6Q06406 YEL009C-AYEL009C-A 408 nt0.73□□□□□ -2.29
LSM6Q06406 RGI1YER067W 486 nt0.73□□□□□ -2.29
LSM6Q06406 YNL067W-AYNL067W-A 147 nt0.73□□□□□ -2.29
LSM6Q06406 YNL089CYNL089C 477 nt0.73□□□□□ -2.29
LSM6Q06406 YLR149CYLR149C 2193 nt0.72□□□□□ -2.29
LSM6Q06406 RPL40AYIL148W 387 nt0.72□□□□□ -2.29
LSM6Q06406 YJL022WYJL022W 309 nt0.72□□□□□ -2.29
LSM6Q06406 CDC5YMR001C 2118 nt0.72□□□□□ -2.29
LSM6Q06406 CYB5YNL111C 363 nt0.72□□□□□ -2.29
LSM6Q06406 YPR146CYPR146C 330 nt0.72□□□□□ -2.29
LSM6Q06406 CST9YLR394W 1449 nt0.72□□□□□ -2.29
LSM6Q06406 tC(GCA)BtC(GCA)B 72 nt0.71□□□□□ -2.3
LSM6Q06406 tC(GCA)GtC(GCA)G 72 nt0.71□□□□□ -2.3
LSM6Q06406 tC(GCA)P1tC(GCA)P1 72 nt0.71□□□□□ -2.3
LSM6Q06406 tC(GCA)P2tC(GCA)P2 72 nt0.71□□□□□ -2.3
LSM6Q06406 NOP10YHR072W-A 177 nt0.71□□□□□ -2.3
LSM6Q06406 RPS18BYML026C 441 nt0.71□□□□□ -2.3
LSM6Q06406 CTK3YML112W 891 nt0.71□□□□□ -2.3
LSM6Q06406 RPB11YOL005C 363 nt0.71□□□□□ -2.3
LSM6Q06406 PET123YOR158W 957 nt0.71□□□□□ -2.3
LSM6Q06406 YOR394C-AYOR394C-A 168 nt0.71□□□□□ -2.3
LSM6Q06406 AZF1YOR113W 2745 nt0.71□□□□□ -2.3
LSM6Q06406 SPT14YPL175W 1359 nt0.7□□□□□ -2.3
LSM6Q06406 SRD1YCR018C 666 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 21 ms