Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 AL512408.1-201ENST00000569378 2000 ntBASIC19.76■□□□□ 0.75
HMGCS1Q01581 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HMGCS1Q01581 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCS1Q01581 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCS1Q01581 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGCS1Q01581 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGCS1Q01581 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGCS1Q01581 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 MIR935-201ENST00000401179 91 ntBASIC19.74■□□□□ 0.75
HMGCS1Q01581 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.74■□□□□ 0.75
HMGCS1Q01581 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGCS1Q01581 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS1Q01581 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS1Q01581 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS1Q01581 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 AC112907.3-201ENST00000577781 2400 ntBASIC19.73■□□□□ 0.75
HMGCS1Q01581 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS1Q01581 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HMGCS1Q01581 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS1Q01581 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGCS1Q01581 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 AC116050.2-201ENST00000612102 1779 ntBASIC19.71■□□□□ 0.75
HMGCS1Q01581 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 AC097381.1-201ENST00000429019 1296 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms