Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NFKB2Q00653 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 KRT19P1-201ENST00000405746 1186 ntBASIC20.3■□□□□ 0.84
NFKB2Q00653 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB2Q00653 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB2Q00653 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.3■□□□□ 0.84
NFKB2Q00653 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB2Q00653 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NFKB2Q00653 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
NFKB2Q00653 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
NFKB2Q00653 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB2Q00653 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NFKB2Q00653 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB2Q00653 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
NFKB2Q00653 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NFKB2Q00653 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NFKB2Q00653 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB2Q00653 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB2Q00653 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB2Q00653 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB2Q00653 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB2Q00653 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB2Q00653 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB2Q00653 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB2Q00653 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.28■□□□□ 0.84
NFKB2Q00653 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NFKB2Q00653 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NFKB2Q00653 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB2Q00653 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NFKB2Q00653 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.28■□□□□ 0.84
NFKB2Q00653 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKB2Q00653 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB2Q00653 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB2Q00653 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
NFKB2Q00653 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB2Q00653 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.27■□□□□ 0.84
NFKB2Q00653 AC142086.2-201ENST00000569753 217 ntBASIC20.27■□□□□ 0.84
NFKB2Q00653 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB2Q00653 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKB2Q00653 AC020907.5-201ENST00000624372 1936 ntBASIC20.27■□□□□ 0.84
NFKB2Q00653 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NFKB2Q00653 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.27■□□□□ 0.83
NFKB2Q00653 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.27■□□□□ 0.83
NFKB2Q00653 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NFKB2Q00653 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 AC104187.1-201ENST00000607510 612 ntBASIC20.26■□□□□ 0.83
NFKB2Q00653 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKB2Q00653 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKB2Q00653 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NFKB2Q00653 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKB2Q00653 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NFKB2Q00653 KRT87P-202ENST00000534226 1464 ntBASIC20.25■□□□□ 0.83
NFKB2Q00653 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms