Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NKX6-1P78426 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX6-1P78426 AL512625.2-201ENST00000417533 625 ntBASIC18.02■□□□□ 0.48
NKX6-1P78426 AC098590.1-201ENST00000468126 897 ntBASIC18.02■□□□□ 0.48
NKX6-1P78426 AC097658.1-201ENST00000475555 843 ntBASIC18.02■□□□□ 0.48
NKX6-1P78426 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
NKX6-1P78426 AC007322.4-201ENST00000509611 723 ntBASIC18.02■□□□□ 0.48
NKX6-1P78426 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.02■□□□□ 0.48
NKX6-1P78426 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.02■□□□□ 0.48
NKX6-1P78426 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX6-1P78426 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX6-1P78426 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-1P78426 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX6-1P78426 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.02■□□□□ 0.48
NKX6-1P78426 AC243732.1-201ENST00000612648 864 ntBASIC18.02■□□□□ 0.48
NKX6-1P78426 RBM17P2-201ENST00000616397 1405 ntBASIC18.02■□□□□ 0.48
NKX6-1P78426 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX6-1P78426 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX6-1P78426 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX6-1P78426 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NKX6-1P78426 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX6-1P78426 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.01■□□□□ 0.47
NKX6-1P78426 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.01■□□□□ 0.47
NKX6-1P78426 BX276092.2-201ENST00000417668 665 ntBASIC18.01■□□□□ 0.47
NKX6-1P78426 GCSHP5-201ENST00000443090 522 ntBASIC18.01■□□□□ 0.47
NKX6-1P78426 AL158047.1-201ENST00000445918 881 ntBASIC18.01■□□□□ 0.47
NKX6-1P78426 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.01■□□□□ 0.47
NKX6-1P78426 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX6-1P78426 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX6-1P78426 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
NKX6-1P78426 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-1P78426 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 WWC2-AS2-201ENST00000578387 2183 ntBASIC18■□□□□ 0.47
NKX6-1P78426 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18■□□□□ 0.47
NKX6-1P78426 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18■□□□□ 0.47
NKX6-1P78426 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18■□□□□ 0.47
NKX6-1P78426 AC093787.1-201ENST00000450396 207 ntBASIC18■□□□□ 0.47
NKX6-1P78426 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18■□□□□ 0.47
NKX6-1P78426 ADM-205ENST00000528544 586 ntTSL 2 BASIC18■□□□□ 0.47
NKX6-1P78426 AC142381.4-202ENST00000563973 229 ntBASIC18■□□□□ 0.47
NKX6-1P78426 AC016405.3-201ENST00000607710 860 ntBASIC18■□□□□ 0.47
NKX6-1P78426 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NKX6-1P78426 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18■□□□□ 0.47
NKX6-1P78426 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-1P78426 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NKX6-1P78426 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.99■□□□□ 0.47
NKX6-1P78426 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NKX6-1P78426 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.99■□□□□ 0.47
NKX6-1P78426 RPS2P4-201ENST00000476944 856 ntBASIC17.99■□□□□ 0.47
NKX6-1P78426 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.99■□□□□ 0.47
NKX6-1P78426 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.99■□□□□ 0.47
NKX6-1P78426 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
NKX6-1P78426 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NKX6-1P78426 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.99■□□□□ 0.47
NKX6-1P78426 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-1P78426 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NKX6-1P78426 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NKX6-1P78426 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.98■□□□□ 0.47
NKX6-1P78426 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-1P78426 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.98■□□□□ 0.47
NKX6-1P78426 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 AC006058.3-201ENST00000606217 1069 ntBASIC17.98■□□□□ 0.47
NKX6-1P78426 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NKX6-1P78426 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NKX6-1P78426 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX6-1P78426 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms