Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
SIRPAP78324 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SIRPAP78324 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPAP78324 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SIRPAP78324 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
SIRPAP78324 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.67■□□□□ 0.58
SIRPAP78324 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SIRPAP78324 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 AL355802.2-201ENST00000402069 882 ntBASIC18.67■□□□□ 0.58
SIRPAP78324 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.67■□□□□ 0.58
SIRPAP78324 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.67■□□□□ 0.58
SIRPAP78324 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.67■□□□□ 0.58
SIRPAP78324 AC104771.1-201ENST00000603335 964 ntBASIC18.67■□□□□ 0.58
SIRPAP78324 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.67■□□□□ 0.58
SIRPAP78324 AL050303.2-201ENST00000619798 666 ntBASIC18.67■□□□□ 0.58
SIRPAP78324 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIRPAP78324 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIRPAP78324 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPAP78324 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.66■□□□□ 0.58
SIRPAP78324 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.66■□□□□ 0.58
SIRPAP78324 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIRPAP78324 CNN2P6-201ENST00000439038 900 ntBASIC18.66■□□□□ 0.58
SIRPAP78324 TERF1P5-201ENST00000477545 1207 ntBASIC18.66■□□□□ 0.58
SIRPAP78324 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.66■□□□□ 0.58
SIRPAP78324 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.66■□□□□ 0.58
SIRPAP78324 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.66■□□□□ 0.58
SIRPAP78324 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.66■□□□□ 0.58
SIRPAP78324 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPAP78324 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SIRPAP78324 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
SIRPAP78324 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
SIRPAP78324 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 GPX1P1-201ENST00000388829 606 ntBASIC18.65■□□□□ 0.58
SIRPAP78324 NCF1B-203ENST00000435988 1254 ntBASIC18.65■□□□□ 0.58
SIRPAP78324 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.65■□□□□ 0.58
SIRPAP78324 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SIRPAP78324 AC013268.1-206ENST00000638368 961 ntBASIC18.65■□□□□ 0.58
SIRPAP78324 AC112229.1-201ENST00000639295 961 ntBASIC18.65■□□□□ 0.58
SIRPAP78324 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPAP78324 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SIRPAP78324 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIRPAP78324 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SIRPAP78324 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SIRPAP78324 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIRPAP78324 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIRPAP78324 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.64■□□□□ 0.57
SIRPAP78324 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 SLC7A5P1-201ENST00000568957 537 ntBASIC18.64■□□□□ 0.57
SIRPAP78324 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 AL121832.2-201ENST00000610979 668 ntBASIC18.64■□□□□ 0.57
SIRPAP78324 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.64■□□□□ 0.57
SIRPAP78324 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SIRPAP78324 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SIRPAP78324 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SIRPAP78324 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPAP78324 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
SIRPAP78324 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms