Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SKP1P63208 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SKP1P63208 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SKP1P63208 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SKP1P63208 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SKP1P63208 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SKP1P63208 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SKP1P63208 MCRIP2P1-201ENST00000394346 511 ntBASIC19.48■□□□□ 0.71
SKP1P63208 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.48■□□□□ 0.71
SKP1P63208 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SKP1P63208 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.48■□□□□ 0.71
SKP1P63208 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SKP1P63208 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SKP1P63208 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
SKP1P63208 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.47■□□□□ 0.71
SKP1P63208 MKRN4P-201ENST00000444706 1521 ntBASIC19.47■□□□□ 0.71
SKP1P63208 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.47■□□□□ 0.71
SKP1P63208 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SKP1P63208 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.47■□□□□ 0.71
SKP1P63208 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SKP1P63208 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
SKP1P63208 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.47■□□□□ 0.71
SKP1P63208 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.47■□□□□ 0.71
SKP1P63208 AC083906.2-201ENST00000511578 360 ntBASIC19.47■□□□□ 0.71
SKP1P63208 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.47■□□□□ 0.71
SKP1P63208 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.47■□□□□ 0.71
SKP1P63208 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.47■□□□□ 0.71
SKP1P63208 AL050303.2-201ENST00000619798 666 ntBASIC19.47■□□□□ 0.71
SKP1P63208 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.47■□□□□ 0.71
SKP1P63208 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.47■□□□□ 0.71
SKP1P63208 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.47■□□□□ 0.71
SKP1P63208 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SKP1P63208 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.46■□□□□ 0.71
SKP1P63208 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.46■□□□□ 0.71
SKP1P63208 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.46■□□□□ 0.71
SKP1P63208 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.46■□□□□ 0.71
SKP1P63208 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.46■□□□□ 0.71
SKP1P63208 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.46■□□□□ 0.71
SKP1P63208 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SKP1P63208 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.46■□□□□ 0.71
SKP1P63208 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.45■□□□□ 0.7
SKP1P63208 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SKP1P63208 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.45■□□□□ 0.7
SKP1P63208 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.45■□□□□ 0.7
SKP1P63208 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
SKP1P63208 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.45■□□□□ 0.7
SKP1P63208 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.45■□□□□ 0.7
SKP1P63208 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.45■□□□□ 0.7
SKP1P63208 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SKP1P63208 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SKP1P63208 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKP1P63208 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SKP1P63208 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKP1P63208 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SKP1P63208 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SKP1P63208 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKP1P63208 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.44■□□□□ 0.7
SKP1P63208 AC010980.2-201ENST00000587099 1412 ntBASIC19.44■□□□□ 0.7
SKP1P63208 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SKP1P63208 ID1-201ENST00000376105 1233 ntBASIC19.44■□□□□ 0.7
SKP1P63208 AL109923.1-201ENST00000618799 583 ntBASIC19.44■□□□□ 0.7
SKP1P63208 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKP1P63208 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKP1P63208 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKP1P63208 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SKP1P63208 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKP1P63208 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.43■□□□□ 0.7
SKP1P63208 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms