Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.69■□□□□ 0.9
AP1S1P61966 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S1P61966 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
AP1S1P61966 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
AP1S1P61966 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.69■□□□□ 0.9
AP1S1P61966 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
AP1S1P61966 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S1P61966 KRT18P68-201ENST00000392293 1000 ntBASIC20.69■□□□□ 0.9
AP1S1P61966 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 MIPEPP3-201ENST00000412105 444 ntBASIC20.69■□□□□ 0.9
AP1S1P61966 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.69■□□□□ 0.9
AP1S1P61966 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
AP1S1P61966 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S1P61966 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S1P61966 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 BX276092.2-201ENST00000417668 665 ntBASIC20.68■□□□□ 0.9
AP1S1P61966 AL355472.2-201ENST00000422958 438 ntBASIC20.68■□□□□ 0.9
AP1S1P61966 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.68■□□□□ 0.9
AP1S1P61966 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 AL589743.5-201ENST00000616611 1050 ntBASIC20.68■□□□□ 0.9
AP1S1P61966 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S1P61966 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S1P61966 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
AP1S1P61966 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
AP1S1P61966 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.67■□□□□ 0.9
AP1S1P61966 AC142086.2-201ENST00000569753 217 ntBASIC20.67■□□□□ 0.9
AP1S1P61966 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.67■□□□□ 0.9
AP1S1P61966 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.67■□□□□ 0.9
AP1S1P61966 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.67■□□□□ 0.9
AP1S1P61966 AC092118.2-201ENST00000613495 667 ntBASIC20.67■□□□□ 0.9
AP1S1P61966 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
AP1S1P61966 MIR2861-201ENST00000636310 90 ntBASIC20.67■□□□□ 0.9
AP1S1P61966 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.67■□□□□ 0.9
AP1S1P61966 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
AP1S1P61966 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
AP1S1P61966 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S1P61966 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.67■□□□□ 0.9
AP1S1P61966 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.67■□□□□ 0.9
AP1S1P61966 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 AL137060.1-201ENST00000618151 2648 ntBASIC20.66■□□□□ 0.9
AP1S1P61966 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
AP1S1P61966 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 LSM12P1-201ENST00000411836 588 ntBASIC20.66■□□□□ 0.9
AP1S1P61966 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 MIR4758-201ENST00000577688 71 ntBASIC20.66■□□□□ 0.9
AP1S1P61966 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
AP1S1P61966 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.66■□□□□ 0.9
AP1S1P61966 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.66■□□□□ 0.9
AP1S1P61966 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
AP1S1P61966 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
AP1S1P61966 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S1P61966 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.65■□□□□ 0.9
AP1S1P61966 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
AP1S1P61966 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.65■□□□□ 0.9
AP1S1P61966 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
AP1S1P61966 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AP1S1P61966 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
AP1S1P61966 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S1P61966 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S1P61966 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S1P61966 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S1P61966 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S1P61966 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.65■□□□□ 0.9
AP1S1P61966 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.65■□□□□ 0.9
AP1S1P61966 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.65■□□□□ 0.9
AP1S1P61966 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.65■□□□□ 0.9
AP1S1P61966 AL356652.1-201ENST00000615962 565 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms