Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MECP2P51608 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MECP2P51608 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MECP2P51608 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.46■□□□□ 0.39
MECP2P51608 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.46■□□□□ 0.39
MECP2P51608 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.46■□□□□ 0.39
MECP2P51608 KRT16P3-201ENST00000439127 1283 ntBASIC17.46■□□□□ 0.39
MECP2P51608 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.46■□□□□ 0.39
MECP2P51608 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.46■□□□□ 0.39
MECP2P51608 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.46■□□□□ 0.39
MECP2P51608 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MECP2P51608 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MECP2P51608 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.46■□□□□ 0.39
MECP2P51608 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
MECP2P51608 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.45■□□□□ 0.38
MECP2P51608 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MECP2P51608 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.45■□□□□ 0.38
MECP2P51608 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MECP2P51608 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MECP2P51608 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
MECP2P51608 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MECP2P51608 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MECP2P51608 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.44■□□□□ 0.38
MECP2P51608 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MECP2P51608 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.44■□□□□ 0.38
MECP2P51608 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 AC068587.7-201ENST00000641602 218 ntBASIC17.44■□□□□ 0.38
MECP2P51608 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MECP2P51608 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.44■□□□□ 0.38
MECP2P51608 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MECP2P51608 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.43■□□□□ 0.38
MECP2P51608 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.43■□□□□ 0.38
MECP2P51608 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.43■□□□□ 0.38
MECP2P51608 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.43■□□□□ 0.38
MECP2P51608 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.43■□□□□ 0.38
MECP2P51608 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.43■□□□□ 0.38
MECP2P51608 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.43■□□□□ 0.38
MECP2P51608 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MECP2P51608 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MECP2P51608 AC125437.2-201ENST00000625180 2167 ntBASIC17.43■□□□□ 0.38
MECP2P51608 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MECP2P51608 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MECP2P51608 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.43■□□□□ 0.38
MECP2P51608 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.43■□□□□ 0.38
MECP2P51608 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms