Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 RRP12YPL012W 3687 nt1.72□□□□□ -2.13
TRM9P49957 PIB1YDR313C 861 nt1.72□□□□□ -2.13
TRM9P49957 CAP1YKL007W 807 nt1.72□□□□□ -2.13
TRM9P49957 ATG38YLR211C 681 nt1.72□□□□□ -2.13
TRM9P49957 ARL1YBR164C 552 nt1.72□□□□□ -2.13
TRM9P49957 ECM25YJL201W 1800 nt1.72□□□□□ -2.13
TRM9P49957 PDR8YLR266C 2106 nt1.72□□□□□ -2.13
TRM9P49957 RAD18YCR066W 1464 nt1.71□□□□□ -2.14
TRM9P49957 YDL118WYDL118W 381 nt1.71□□□□□ -2.14
TRM9P49957 FMP16YDR070C 282 nt1.71□□□□□ -2.14
TRM9P49957 YER068C-AYER068C-A 432 nt1.71□□□□□ -2.14
TRM9P49957 YPS5YGL259W 498 nt1.71□□□□□ -2.14
TRM9P49957 CUP1-1YHR053C 186 nt1.71□□□□□ -2.14
TRM9P49957 CUP1-2YHR055C 186 nt1.71□□□□□ -2.14
TRM9P49957 YIL058WYIL058W 285 nt1.71□□□□□ -2.14
TRM9P49957 SHE2YKL130C 741 nt1.71□□□□□ -2.14
TRM9P49957 HYM1YKL189W 1200 nt1.71□□□□□ -2.14
TRM9P49957 YMR173W-AYMR173W-A 1185 nt1.71□□□□□ -2.14
TRM9P49957 PAI3YMR174C 207 nt1.71□□□□□ -2.14
TRM9P49957 YIP3YNL044W 531 nt1.71□□□□□ -2.14
TRM9P49957 GIM3YNL153C 390 nt1.71□□□□□ -2.14
TRM9P49957 FYV12YOR183W 390 nt1.71□□□□□ -2.14
TRM9P49957 YPL039WYPL039W 951 nt1.71□□□□□ -2.14
TRM9P49957 YBR051WYBR051W 351 nt1.71□□□□□ -2.14
TRM9P49957 ARR2YPR200C 393 nt1.71□□□□□ -2.14
TRM9P49957 MED8YBR193C 672 nt1.71□□□□□ -2.14
TRM9P49957 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
TRM9P49957 MTG1YMR097C 1104 nt1.7□□□□□ -2.14
TRM9P49957 SNF12YNR023W 1701 nt1.7□□□□□ -2.14
TRM9P49957 DNF3YMR162C 4971 nt1.7□□□□□ -2.14
TRM9P49957 MGA2YIR033W 3342 nt1.7□□□□□ -2.14
TRM9P49957 SHS1YDL225W 1656 nt1.7□□□□□ -2.14
TRM9P49957 LEU3YLR451W 2661 nt1.7□□□□□ -2.14
TRM9P49957 LRE1YCL051W 1752 nt1.7□□□□□ -2.14
TRM9P49957 CDC60YPL160W 3273 nt1.69□□□□□ -2.14
TRM9P49957 IRC20YLR247C 4671 nt1.69□□□□□ -2.14
TRM9P49957 NCB2YDR397C 441 nt1.69□□□□□ -2.14
TRM9P49957 YHR022CYHR022C 771 nt1.69□□□□□ -2.14
TRM9P49957 YHR210CYHR210C 1026 nt1.69□□□□□ -2.14
TRM9P49957 YKR075W-AYKR075W-A 270 nt1.69□□□□□ -2.14
TRM9P49957 NSL1YPL233W 651 nt1.69□□□□□ -2.14
TRM9P49957 ASG1YIL130W 2895 nt1.69□□□□□ -2.14
TRM9P49957 UBP11YKR098C 2154 nt1.69□□□□□ -2.14
TRM9P49957 HER1YOR227W 3741 nt1.69□□□□□ -2.14
TRM9P49957 CAT2YML042W 2013 nt1.69□□□□□ -2.14
TRM9P49957 MPC1YGL080W 393 nt1.68□□□□□ -2.14
TRM9P49957 POL32YJR043C 1053 nt1.68□□□□□ -2.14
TRM9P49957 RLP24YLR009W 600 nt1.68□□□□□ -2.14
TRM9P49957 TOA1YOR194C 861 nt1.68□□□□□ -2.14
TRM9P49957 YJR098CYJR098C 1971 nt1.68□□□□□ -2.14
TRM9P49957 YNL034WYNL034W 1839 nt1.68□□□□□ -2.14
TRM9P49957 HSH155YMR288W 2916 nt1.67□□□□□ -2.14
TRM9P49957 BRR2YER172C 6492 nt1.67□□□□□ -2.14
TRM9P49957 PTC5YOR090C 1719 nt1.67□□□□□ -2.14
TRM9P49957 IRC4YDR540C 540 nt1.67□□□□□ -2.14
TRM9P49957 RMD6YEL072W 696 nt1.67□□□□□ -2.14
TRM9P49957 GPN3YLR243W 819 nt1.67□□□□□ -2.14
TRM9P49957 TMA7YLR262C-A 195 nt1.67□□□□□ -2.14
TRM9P49957 YML084WYML084W 309 nt1.67□□□□□ -2.14
TRM9P49957 ATX2YOR079C 942 nt1.67□□□□□ -2.14
TRM9P49957 YOR333CYOR333C 417 nt1.67□□□□□ -2.14
TRM9P49957 UBS1YBR165W 834 nt1.67□□□□□ -2.14
TRM9P49957 ECM5YMR176W 4236 nt1.67□□□□□ -2.14
TRM9P49957 MNE1YOR350C 1992 nt1.67□□□□□ -2.14
TRM9P49957 CDC53YDL132W 2448 nt1.66□□□□□ -2.14
TRM9P49957 YCR081C-AYCR081C-A 237 nt1.66□□□□□ -2.14
TRM9P49957 HTB1YDR224C 396 nt1.66□□□□□ -2.14
TRM9P49957 NTF2YER009W 378 nt1.66□□□□□ -2.14
TRM9P49957 RPS16AYMR143W 432 nt1.66□□□□□ -2.14
TRM9P49957 YMR306C-AYMR306C-A 390 nt1.66□□□□□ -2.14
TRM9P49957 ARL3YPL051W 597 nt1.66□□□□□ -2.14
TRM9P49957 DFG16YOR030W 1860 nt1.66□□□□□ -2.14
TRM9P49957 CFT2YLR115W 2580 nt1.66□□□□□ -2.14
TRM9P49957 REV1YOR346W 2958 nt1.66□□□□□ -2.14
TRM9P49957 YDR034C-CYDR034C-C 1317 nt1.66□□□□□ -2.14
TRM9P49957 YLR410W-AYLR410W-A 1317 nt1.66□□□□□ -2.14
TRM9P49957 AHC2YCR082W 387 nt1.65□□□□□ -2.15
TRM9P49957 CDC50YCR094W 1176 nt1.65□□□□□ -2.15
TRM9P49957 YGL165CYGL165C 579 nt1.65□□□□□ -2.15
TRM9P49957 RPA34YJL148W 702 nt1.65□□□□□ -2.15
TRM9P49957 YLR302CYLR302C 363 nt1.65□□□□□ -2.15
TRM9P49957 YNR021WYNR021W 1215 nt1.65□□□□□ -2.15
TRM9P49957 YOL150CYOL150C 312 nt1.65□□□□□ -2.15
TRM9P49957 MGE1YOR232W 687 nt1.65□□□□□ -2.15
TRM9P49957 MUD1YBR119W 897 nt1.65□□□□□ -2.15
TRM9P49957 APA1YCL050C 966 nt1.65□□□□□ -2.15
TRM9P49957 ADF1YCL058W-A 342 nt1.65□□□□□ -2.15
TRM9P49957 MYO2YOR326W 4725 nt1.64□□□□□ -2.15
TRM9P49957 YDL157CYDL157C 357 nt1.64□□□□□ -2.15
TRM9P49957 YDR018CYDR018C 1191 nt1.64□□□□□ -2.15
TRM9P49957 COX6YHR051W 447 nt1.64□□□□□ -2.15
TRM9P49957 tT(UGU)HtT(UGU)H 72 nt1.64□□□□□ -2.15
TRM9P49957 MSL1YIR009W 336 nt1.64□□□□□ -2.15
TRM9P49957 VPS63YLR261C 327 nt1.64□□□□□ -2.15
TRM9P49957 HCS1YKL017C 2052 nt1.63□□□□□ -2.15
TRM9P49957 RPL37BYDR500C 267 nt1.63□□□□□ -2.15
TRM9P49957 YER138W-AYER138W-A 105 nt1.63□□□□□ -2.15
TRM9P49957 AIM23YJL131C 1071 nt1.63□□□□□ -2.15
TRM9P49957 YJL147CYJL147C 1149 nt1.63□□□□□ -2.15
TRM9P49957 SNC1YAL030W 354 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms