Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YGR149WYGR149W 1299 nt0.98□□□□□ -2.25
TY1B-JR1P47098 SMD3YLR147C 306 nt0.98□□□□□ -2.25
TY1B-JR1P47098 YIP3YNL044W 531 nt0.98□□□□□ -2.25
TY1B-JR1P47098 YOR062CYOR062C 807 nt0.98□□□□□ -2.25
TY1B-JR1P47098 YOL114CYOL114C 609 nt0.98□□□□□ -2.25
TY1B-JR1P47098 DPB3YBR278W 606 nt0.98□□□□□ -2.25
TY1B-JR1P47098 RIT1YMR283C 1542 nt0.97□□□□□ -2.25
TY1B-JR1P47098 PDS5YMR076C 3834 nt0.97□□□□□ -2.25
TY1B-JR1P47098 CTF18YMR078C 2226 nt0.97□□□□□ -2.25
TY1B-JR1P47098 TIM21YGR033C 720 nt0.97□□□□□ -2.25
TY1B-JR1P47098 BSC2YDR275W 708 nt0.96□□□□□ -2.26
TY1B-JR1P47098 YGR015CYGR015C 987 nt0.96□□□□□ -2.26
TY1B-JR1P47098 EMC2YJR088C 879 nt0.96□□□□□ -2.26
TY1B-JR1P47098 SEC59YMR013C 1560 nt0.96□□□□□ -2.26
TY1B-JR1P47098 SDC1YDR469W 528 nt0.96□□□□□ -2.26
TY1B-JR1P47098 YGR026WYGR026W 837 nt0.96□□□□□ -2.26
TY1B-JR1P47098 CSM2YIL132C 642 nt0.96□□□□□ -2.26
TY1B-JR1P47098 SFT1YKL006C-A 294 nt0.96□□□□□ -2.26
TY1B-JR1P47098 GPN3YLR243W 819 nt0.96□□□□□ -2.26
TY1B-JR1P47098 YNL143CYNL143C 393 nt0.96□□□□□ -2.26
TY1B-JR1P47098 ZRG8YER033C 3231 nt0.95□□□□□ -2.26
TY1B-JR1P47098 FIP1YJR093C 984 nt0.95□□□□□ -2.26
TY1B-JR1P47098 MPS1YDL028C 2295 nt0.95□□□□□ -2.26
TY1B-JR1P47098 YGL242CYGL242C 546 nt0.94□□□□□ -2.26
TY1B-JR1P47098 YGR290WYGR290W 444 nt0.94□□□□□ -2.26
TY1B-JR1P47098 MSA2YKR077W 1092 nt0.94□□□□□ -2.26
TY1B-JR1P47098 NOP15YNL110C 663 nt0.94□□□□□ -2.26
TY1B-JR1P47098 YBR096WYBR096W 693 nt0.94□□□□□ -2.26
TY1B-JR1P47098 HTA1YDR225W 399 nt0.93□□□□□ -2.26
TY1B-JR1P47098 YIL068W-AYIL068W-A 384 nt0.93□□□□□ -2.26
TY1B-JR1P47098 USV1YPL230W 1176 nt0.93□□□□□ -2.26
TY1B-JR1P47098 GCD2YGR083C 1956 nt0.93□□□□□ -2.26
TY1B-JR1P47098 TAH1YCR060W 336 nt0.93□□□□□ -2.26
TY1B-JR1P47098 MLH3YPL164C 2148 nt0.92□□□□□ -2.26
TY1B-JR1P47098 SUI2YJR007W 915 nt0.92□□□□□ -2.26
TY1B-JR1P47098 YLR053CYLR053C 327 nt0.92□□□□□ -2.26
TY1B-JR1P47098 HSH49YOR319W 642 nt0.92□□□□□ -2.26
TY1B-JR1P47098 LDH1YBR204C 1128 nt0.92□□□□□ -2.26
TY1B-JR1P47098 YDL186WYDL186W 834 nt0.91□□□□□ -2.26
TY1B-JR1P47098 YIR020C-BYIR020C-B 735 nt0.91□□□□□ -2.26
TY1B-JR1P47098 RRT15YLR162W-A 189 nt0.91□□□□□ -2.26
TY1B-JR1P47098 UBX4YMR067C 1251 nt0.91□□□□□ -2.26
TY1B-JR1P47098 CTK1YKL139W 1587 nt0.91□□□□□ -2.26
TY1B-JR1P47098 COG1YGL223C 1254 nt0.91□□□□□ -2.26
TY1B-JR1P47098 FSH1YHR049W 732 nt0.91□□□□□ -2.26
TY1B-JR1P47098 STB4YMR019W 2850 nt0.9□□□□□ -2.27
TY1B-JR1P47098 GTR2YGR163W 1026 nt0.9□□□□□ -2.27
TY1B-JR1P47098 HAP4YKL109W 1665 nt0.9□□□□□ -2.27
TY1B-JR1P47098 RKR1YMR247C 4689 nt0.9□□□□□ -2.27
TY1B-JR1P47098 CLC1YGR167W 702 nt0.89□□□□□ -2.27
TY1B-JR1P47098 SNX4YJL036W 1272 nt0.89□□□□□ -2.27
TY1B-JR1P47098 NCL1YBL024W 2055 nt0.89□□□□□ -2.27
TY1B-JR1P47098 YDL062WYDL062W 426 nt0.88□□□□□ -2.27
TY1B-JR1P47098 BNA7YDR428C 786 nt0.88□□□□□ -2.27
TY1B-JR1P47098 RPA12YJR063W 378 nt0.88□□□□□ -2.27
TY1B-JR1P47098 YUH1YJR099W 711 nt0.88□□□□□ -2.27
TY1B-JR1P47098 IFH1YLR223C 3258 nt0.88□□□□□ -2.27
TY1B-JR1P47098 STE24YJR117W 1362 nt0.88□□□□□ -2.27
TY1B-JR1P47098 RPL31AYDL075W 342 nt0.88□□□□□ -2.27
TY1B-JR1P47098 YJL169WYJL169W 369 nt0.88□□□□□ -2.27
TY1B-JR1P47098 VMA5YKL080W 1179 nt0.88□□□□□ -2.27
TY1B-JR1P47098 YNR034W-AYNR034W-A 297 nt0.88□□□□□ -2.27
TY1B-JR1P47098 ESC2YDR363W 1371 nt0.87□□□□□ -2.27
TY1B-JR1P47098 PCL6YER059W 1263 nt0.87□□□□□ -2.27
TY1B-JR1P47098 ISA2YPR067W 558 nt0.87□□□□□ -2.27
TY1B-JR1P47098 YEL075CYEL075C 369 nt0.86□□□□□ -2.27
TY1B-JR1P47098 RSA3YLR221C 663 nt0.86□□□□□ -2.27
TY1B-JR1P47098 YBL028CYBL028C 321 nt0.86□□□□□ -2.27
TY1B-JR1P47098 YER119C-AYER119C-A 372 nt0.85□□□□□ -2.27
TY1B-JR1P47098 OMA1YKR087C 1038 nt0.85□□□□□ -2.27
TY1B-JR1P47098 FCF2YLR051C 654 nt0.85□□□□□ -2.27
TY1B-JR1P47098 YOR314WYOR314W 330 nt0.85□□□□□ -2.27
TY1B-JR1P47098 SWI6YLR182W 2412 nt0.85□□□□□ -2.27
TY1B-JR1P47098 YDL050CYDL050C 372 nt0.85□□□□□ -2.27
TY1B-JR1P47098 EMT1tM(CAU)D 73 nt0.85□□□□□ -2.27
TY1B-JR1P47098 EMT5tM(CAU)J1 73 nt0.85□□□□□ -2.27
TY1B-JR1P47098 EMT3tM(CAU)J2 73 nt0.85□□□□□ -2.27
TY1B-JR1P47098 EMT4tM(CAU)M 73 nt0.85□□□□□ -2.27
TY1B-JR1P47098 EMT2tM(CAU)O2 73 nt0.85□□□□□ -2.27
TY1B-JR1P47098 UBP11YKR098C 2154 nt0.84□□□□□ -2.27
TY1B-JR1P47098 YAR075WYAR075W 474 nt0.84□□□□□ -2.27
TY1B-JR1P47098 snR11snR11 258 nt0.84□□□□□ -2.27
TY1B-JR1P47098 PRM4YPL156C 855 nt0.84□□□□□ -2.27
TY1B-JR1P47098 RGM1YMR182C 636 nt0.83□□□□□ -2.28
TY1B-JR1P47098 PUF4YGL014W 2667 nt0.83□□□□□ -2.28
TY1B-JR1P47098 PCL9YDL179W 915 nt0.83□□□□□ -2.28
TY1B-JR1P47098 MED11YMR112C 396 nt0.83□□□□□ -2.28
TY1B-JR1P47098 YMR144WYMR144W 1029 nt0.83□□□□□ -2.28
TY1B-JR1P47098 SHE3YBR130C 1278 nt0.83□□□□□ -2.28
TY1B-JR1P47098 AVT5YBL089W 1380 nt0.83□□□□□ -2.28
TY1B-JR1P47098 NUP145YGL092W 3954 nt0.82□□□□□ -2.28
TY1B-JR1P47098 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
TY1B-JR1P47098 BST1YFL025C 3090 nt0.82□□□□□ -2.28
TY1B-JR1P47098 BEM3YPL115C 3387 nt0.81□□□□□ -2.28
TY1B-JR1P47098 TRM2YKR056W 1920 nt0.81□□□□□ -2.28
TY1B-JR1P47098 UBC13YDR092W 462 nt0.81□□□□□ -2.28
TY1B-JR1P47098 RSM26YJR101W 801 nt0.81□□□□□ -2.28
TY1B-JR1P47098 YKR075W-AYKR075W-A 270 nt0.81□□□□□ -2.28
TY1B-JR1P47098 DAL5YJR152W 1632 nt0.81□□□□□ -2.28
TY1B-JR1P47098 ALY2YJL084C 3141 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms