Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 SMC6YLR383W 3345 nt3.09□□□□□ -1.92
VPS27P40343 SNF12YNR023W 1701 nt3.08□□□□□ -1.92
VPS27P40343 YOL150CYOL150C 312 nt3.08□□□□□ -1.92
VPS27P40343 ISU1YPL135W 498 nt3.08□□□□□ -1.92
VPS27P40343 MSB1YOR188W 3414 nt3.07□□□□□ -1.92
VPS27P40343 YCR081C-AYCR081C-A 237 nt3.07□□□□□ -1.92
VPS27P40343 GPI19YDR437W 423 nt3.07□□□□□ -1.92
VPS27P40343 RPL16AYIL133C 600 nt3.07□□□□□ -1.92
VPS27P40343 BET3YKR068C 582 nt3.07□□□□□ -1.92
VPS27P40343 SGS1YMR190C 4344 nt3.07□□□□□ -1.92
VPS27P40343 ASM4YDL088C 1587 nt3.07□□□□□ -1.92
VPS27P40343 YIL080WYIL080W 4722 nt3.06□□□□□ -1.92
VPS27P40343 YJL007CYJL007C 315 nt3.06□□□□□ -1.92
VPS27P40343 AIM32YML050W 936 nt3.06□□□□□ -1.92
VPS27P40343 RUF22RUF22 515 nt3.06□□□□□ -1.92
VPS27P40343 SVL3YPL032C 2478 nt3.06□□□□□ -1.92
VPS27P40343 ARR2YPR200C 393 nt3.06□□□□□ -1.92
VPS27P40343 NUM1YDR150W 8247 nt3.05□□□□□ -1.92
VPS27P40343 SDC25YLL016W 3147 nt3.05□□□□□ -1.92
VPS27P40343 UBP16YPL072W 1500 nt3.05□□□□□ -1.92
VPS27P40343 MMS1YPR164W 4224 nt3.05□□□□□ -1.92
VPS27P40343 RVS161YCR009C 798 nt3.05□□□□□ -1.92
VPS27P40343 YER038W-AYER038W-A 381 nt3.05□□□□□ -1.92
VPS27P40343 ARV1YLR242C 966 nt3.05□□□□□ -1.92
VPS27P40343 YNL146C-AYNL146C-A 195 nt3.05□□□□□ -1.92
VPS27P40343 ATX2YOR079C 942 nt3.05□□□□□ -1.92
VPS27P40343 snR43snR43 209 nt3.05□□□□□ -1.92
VPS27P40343 RLF2YPR018W 1821 nt3.05□□□□□ -1.92
VPS27P40343 ESC1YMR219W 4977 nt3.04□□□□□ -1.92
VPS27P40343 snR76snR76 109 nt3.04□□□□□ -1.92
VPS27P40343 RPL29YFR032C-A 180 nt3.04□□□□□ -1.92
VPS27P40343 YAP3YHL009C 993 nt3.04□□□□□ -1.92
VPS27P40343 RPS29AYLR388W 171 nt3.04□□□□□ -1.92
VPS27P40343 LSM2YBL026W 288 nt3.04□□□□□ -1.92
VPS27P40343 CRS5YOR031W 210 nt3.04□□□□□ -1.92
VPS27P40343 COG3YER157W 2406 nt3.04□□□□□ -1.92
VPS27P40343 PUF4YGL014W 2667 nt3.04□□□□□ -1.92
VPS27P40343 FAR11YNL127W 2862 nt3.03□□□□□ -1.92
VPS27P40343 AMS1YGL156W 3252 nt3.03□□□□□ -1.92
VPS27P40343 SMY2YBR172C 2223 nt3.03□□□□□ -1.92
VPS27P40343 COX13YGL191W 390 nt3.03□□□□□ -1.92
VPS27P40343 YLR154W-EYLR154W-E 204 nt3.03□□□□□ -1.92
VPS27P40343 PBI2YNL015W 228 nt3.03□□□□□ -1.92
VPS27P40343 YKU80YMR106C 1890 nt3.03□□□□□ -1.93
VPS27P40343 SIP3YNL257C 3690 nt3.02□□□□□ -1.93
VPS27P40343 YCR064CYCR064C 411 nt3.02□□□□□ -1.93
VPS27P40343 LAG1YHL003C 1236 nt3.02□□□□□ -1.93
VPS27P40343 YHR130CYHR130C 336 nt3.02□□□□□ -1.93
VPS27P40343 SPC1YJR010C-A 285 nt3.02□□□□□ -1.93
VPS27P40343 SYM1YLR251W 594 nt3.02□□□□□ -1.93
VPS27P40343 PEP12YOR036W 867 nt3.02□□□□□ -1.93
VPS27P40343 TMN3YER113C 2121 nt3.02□□□□□ -1.93
VPS27P40343 YDR239CYDR239C 2364 nt3.01□□□□□ -1.93
VPS27P40343 RTS3YGR161C 792 nt3.01□□□□□ -1.93
VPS27P40343 YAL042C-AYAL042C-A 378 nt3.01□□□□□ -1.93
VPS27P40343 CTK3YML112W 891 nt3.01□□□□□ -1.93
VPS27P40343 GPI15YNL038W 690 nt3.01□□□□□ -1.93
VPS27P40343 SWM2YNR004W 441 nt3.01□□□□□ -1.93
VPS27P40343 ESF2YNR054C 951 nt3.01□□□□□ -1.93
VPS27P40343 SCD5YOR329C 2619 nt3.01□□□□□ -1.93
VPS27P40343 YKR078WYKR078W 1758 nt3□□□□□ -1.93
VPS27P40343 snR70snR70 164 nt3□□□□□ -1.93
VPS27P40343 YDR209CYDR209C 414 nt3□□□□□ -1.93
VPS27P40343 ADK1YDR226W 669 nt3□□□□□ -1.93
VPS27P40343 TIF35YDR429C 825 nt3□□□□□ -1.93
VPS27P40343 YER079C-AYER079C-A 339 nt3□□□□□ -1.93
VPS27P40343 YER084W-AYER084W-A 513 nt3□□□□□ -1.93
VPS27P40343 YFL019CYFL019C 354 nt3□□□□□ -1.93
VPS27P40343 SAS2YMR127C 1017 nt3□□□□□ -1.93
VPS27P40343 YNL046WYNL046W 519 nt3□□□□□ -1.93
VPS27P40343 SPC29YPL124W 762 nt3□□□□□ -1.93
VPS27P40343 YPL205CYPL205C 345 nt3□□□□□ -1.93
VPS27P40343 NSL1YPL233W 651 nt3□□□□□ -1.93
VPS27P40343 YBR076C-AYBR076C-A 267 nt3□□□□□ -1.93
VPS27P40343 MLH1YMR167W 2310 nt2.99□□□□□ -1.93
VPS27P40343 BUB1YGR188C 3066 nt2.99□□□□□ -1.93
VPS27P40343 OSW7YFR039C 1533 nt2.99□□□□□ -1.93
VPS27P40343 BNA7YDR428C 786 nt2.99□□□□□ -1.93
VPS27P40343 TSA2YDR453C 591 nt2.99□□□□□ -1.93
VPS27P40343 RAD6YGL058W 519 nt2.99□□□□□ -1.93
VPS27P40343 YJR157WYJR157W 363 nt2.99□□□□□ -1.93
VPS27P40343 RGM1YMR182C 636 nt2.99□□□□□ -1.93
VPS27P40343 RPL36AYMR194W 303 nt2.99□□□□□ -1.93
VPS27P40343 ACM1YPL267W 630 nt2.99□□□□□ -1.93
VPS27P40343 INO80YGL150C 4470 nt2.99□□□□□ -1.93
VPS27P40343 ORC2YBR060C 1863 nt2.99□□□□□ -1.93
VPS27P40343 TPS2YDR074W 2691 nt2.98□□□□□ -1.93
VPS27P40343 KRE33YNL132W 3171 nt2.98□□□□□ -1.93
VPS27P40343 YEF3YLR249W 3135 nt2.98□□□□□ -1.93
VPS27P40343 RPS17BYDR447C 411 nt2.98□□□□□ -1.93
VPS27P40343 YER189WYER189W 369 nt2.98□□□□□ -1.93
VPS27P40343 YGR050CYGR050C 357 nt2.98□□□□□ -1.93
VPS27P40343 YJL202CYJL202C 348 nt2.98□□□□□ -1.93
VPS27P40343 CMS1YLR003C 876 nt2.98□□□□□ -1.93
VPS27P40343 YLR171WYLR171W 390 nt2.98□□□□□ -1.93
VPS27P40343 YPL080CYPL080C 327 nt2.98□□□□□ -1.93
VPS27P40343 YPR177CYPR177C 372 nt2.98□□□□□ -1.93
VPS27P40343 NPR1YNL183C 2373 nt2.98□□□□□ -1.93
VPS27P40343 SWA2YDR320C 2007 nt2.98□□□□□ -1.93
VPS27P40343 RTR2YDR066C 591 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms