Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 YAL037WYAL037W 804 nt2.61□□□□□ -1.99
RPH1P39956 BET3YKR068C 582 nt2.61□□□□□ -1.99
RPH1P39956 ARV1YLR242C 966 nt2.61□□□□□ -1.99
RPH1P39956 YMR194C-AYMR194C-A 225 nt2.61□□□□□ -1.99
RPH1P39956 RRT16YNL105W 429 nt2.61□□□□□ -1.99
RPH1P39956 NOP15YNL110C 663 nt2.61□□□□□ -1.99
RPH1P39956 SRO77YBL106C 3033 nt2.61□□□□□ -1.99
RPH1P39956 UTP14YML093W 2700 nt2.6□□□□□ -1.99
RPH1P39956 YDR250CYDR250C 276 nt2.6□□□□□ -1.99
RPH1P39956 HPA3YEL066W 540 nt2.6□□□□□ -1.99
RPH1P39956 RPL14BYHL001W 417 nt2.6□□□□□ -1.99
RPH1P39956 CMS1YLR003C 876 nt2.6□□□□□ -1.99
RPH1P39956 YLR302CYLR302C 363 nt2.6□□□□□ -1.99
RPH1P39956 PKR1YMR123W 369 nt2.6□□□□□ -1.99
RPH1P39956 CMC2YBL059C-A 330 nt2.6□□□□□ -1.99
RPH1P39956 YOL159CYOL159C 516 nt2.6□□□□□ -1.99
RPH1P39956 OST2YOR103C 393 nt2.6□□□□□ -1.99
RPH1P39956 RRD2YPL152W 1077 nt2.6□□□□□ -1.99
RPH1P39956 ARR2YPR200C 393 nt2.6□□□□□ -1.99
RPH1P39956 MET6YER091C 2304 nt2.6□□□□□ -1.99
RPH1P39956 AXL1YPR122W 3627 nt2.6□□□□□ -1.99
RPH1P39956 FKS3YMR306W 5358 nt2.6□□□□□ -1.99
RPH1P39956 PRP8YHR165C 7242 nt2.6□□□□□ -1.99
RPH1P39956 SPE1YKL184W 1401 nt2.59□□□□□ -1.99
RPH1P39956 PDS5YMR076C 3834 nt2.59□□□□□ -1.99
RPH1P39956 ALY1YKR021W 2748 nt2.59□□□□□ -1.99
RPH1P39956 YER006C-AYER006C-A 318 nt2.59□□□□□ -1.99
RPH1P39956 YER087C-AYER087C-A 552 nt2.59□□□□□ -1.99
RPH1P39956 YER135CYER135C 393 nt2.59□□□□□ -1.99
RPH1P39956 SPC1YJR010C-A 285 nt2.59□□□□□ -1.99
RPH1P39956 MRP49YKL167C 414 nt2.59□□□□□ -1.99
RPH1P39956 YNL179CYNL179C 438 nt2.59□□□□□ -1.99
RPH1P39956 YBR085C-AYBR085C-A 258 nt2.59□□□□□ -1.99
RPH1P39956 YBR209WYBR209W 318 nt2.59□□□□□ -1.99
RPH1P39956 21S_rRNA21S_rRNA 3296 nt2.59□□□□□ -1.99
RPH1P39956 STN1YDR082W 1485 nt2.58□□□□□ -2
RPH1P39956 KHA1YJL094C 2622 nt2.58□□□□□ -2
RPH1P39956 YDR034C-DYDR034C-D 5313 nt2.58□□□□□ -2
RPH1P39956 HYP2YEL034W 474 nt2.58□□□□□ -2
RPH1P39956 YHR138CYHR138C 345 nt2.58□□□□□ -2
RPH1P39956 TPM2YIL138C 486 nt2.58□□□□□ -2
RPH1P39956 YOR248WYOR248W 303 nt2.58□□□□□ -2
RPH1P39956 snR43snR43 209 nt2.58□□□□□ -2
RPH1P39956 CWC22YGR278W 1734 nt2.58□□□□□ -2
RPH1P39956 YDR098C-BYDR098C-B 5268 nt2.58□□□□□ -2
RPH1P39956 YDR210C-DYDR210C-D 5268 nt2.58□□□□□ -2
RPH1P39956 YDR316W-BYDR316W-B 5268 nt2.58□□□□□ -2
RPH1P39956 YDR365W-BYDR365W-B 5268 nt2.58□□□□□ -2
RPH1P39956 YER138CYER138C 5268 nt2.58□□□□□ -2
RPH1P39956 YER160CYER160C 5268 nt2.58□□□□□ -2
RPH1P39956 YGR038C-BYGR038C-B 5268 nt2.58□□□□□ -2
RPH1P39956 YGR161C-DYGR161C-D 5268 nt2.58□□□□□ -2
RPH1P39956 YJR027WYJR027W 5268 nt2.58□□□□□ -2
RPH1P39956 YLR157C-BYLR157C-B 5268 nt2.58□□□□□ -2
RPH1P39956 YML039WYML039W 5268 nt2.58□□□□□ -2
RPH1P39956 YML045WYML045W 5268 nt2.58□□□□□ -2
RPH1P39956 YMR050CYMR050C 5268 nt2.58□□□□□ -2
RPH1P39956 YOL103W-BYOL103W-B 5268 nt2.58□□□□□ -2
RPH1P39956 YBR012W-BYBR012W-B 5271 nt2.58□□□□□ -2
RPH1P39956 YOR142W-BYOR142W-B 5268 nt2.58□□□□□ -2
RPH1P39956 YPL257W-BYPL257W-B 5268 nt2.58□□□□□ -2
RPH1P39956 YPR158W-BYPR158W-B 5271 nt2.58□□□□□ -2
RPH1P39956 RUD3YOR216C 1455 nt2.58□□□□□ -2
RPH1P39956 GEA1YJR031C 4227 nt2.57□□□□□ -2
RPH1P39956 BNI4YNL233W 2679 nt2.57□□□□□ -2
RPH1P39956 PDR1YGL013C 3207 nt2.57□□□□□ -2
RPH1P39956 RGR1YLR071C 3249 nt2.57□□□□□ -2
RPH1P39956 SOK1YDR006C 2706 nt2.57□□□□□ -2
RPH1P39956 YER079C-AYER079C-A 339 nt2.57□□□□□ -2
RPH1P39956 RPS26BYER131W 360 nt2.57□□□□□ -2
RPH1P39956 GLC7YER133W 939 nt2.57□□□□□ -2
RPH1P39956 TCD1YHR003C 1290 nt2.57□□□□□ -2
RPH1P39956 YHR125WYHR125W 306 nt2.57□□□□□ -2
RPH1P39956 YAR047CYAR047C 321 nt2.57□□□□□ -2
RPH1P39956 YPL034WYPL034W 498 nt2.57□□□□□ -2
RPH1P39956 ARK1YNL020C 1917 nt2.57□□□□□ -2
RPH1P39956 AYT1YLL063C 1425 nt2.57□□□□□ -2
RPH1P39956 ECM29YHL030W 5607 nt2.57□□□□□ -2
RPH1P39956 NAB6YML117W 3405 nt2.56□□□□□ -2
RPH1P39956 NEW1YPL226W 3591 nt2.56□□□□□ -2
RPH1P39956 YER038W-AYER038W-A 381 nt2.56□□□□□ -2
RPH1P39956 RTR1YER139C 681 nt2.56□□□□□ -2
RPH1P39956 LSM8YJR022W 330 nt2.56□□□□□ -2
RPH1P39956 YLR269CYLR269C 351 nt2.56□□□□□ -2
RPH1P39956 HHT2YNL031C 411 nt2.56□□□□□ -2
RPH1P39956 NGL1YOL042W 1092 nt2.56□□□□□ -2
RPH1P39956 YOR029WYOR029W 336 nt2.56□□□□□ -2
RPH1P39956 YBR012W-AYBR012W-A 1323 nt2.56□□□□□ -2
RPH1P39956 YOR142W-AYOR142W-A 1323 nt2.56□□□□□ -2
RPH1P39956 YPR158W-AYPR158W-A 1323 nt2.56□□□□□ -2
RPH1P39956 YDR239CYDR239C 2364 nt2.56□□□□□ -2
RPH1P39956 URB2YJR041C 3525 nt2.55□□□□□ -2
RPH1P39956 YIL012WYIL012W 342 nt2.55□□□□□ -2
RPH1P39956 RMP1YLR145W 606 nt2.55□□□□□ -2
RPH1P39956 YBR012CYBR012C 420 nt2.55□□□□□ -2
RPH1P39956 HEM4YOR278W 828 nt2.55□□□□□ -2
RPH1P39956 ALG14YBR070C 714 nt2.55□□□□□ -2
RPH1P39956 VPS41YDR080W 2979 nt2.55□□□□□ -2
RPH1P39956 YKL100CYKL100C 1764 nt2.54□□□□□ -2
RPH1P39956 SWF1YDR126W 1011 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 29.8 ms