Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.83■□□□□ 0.44
GDNFP39905 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.83■□□□□ 0.44
GDNFP39905 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GDNFP39905 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GDNFP39905 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GDNFP39905 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
GDNFP39905 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GDNFP39905 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 AC099791.1-201ENST00000416440 715 ntBASIC17.82■□□□□ 0.44
GDNFP39905 AP005435.1-201ENST00000529293 1178 ntBASIC17.82■□□□□ 0.44
GDNFP39905 AF213884.3-201ENST00000563833 479 ntBASIC17.82■□□□□ 0.44
GDNFP39905 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 AL034346.1-201ENST00000568244 1277 ntBASIC17.82■□□□□ 0.44
GDNFP39905 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.82■□□□□ 0.44
GDNFP39905 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
GDNFP39905 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDNFP39905 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.82■□□□□ 0.44
GDNFP39905 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDNFP39905 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDNFP39905 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GDNFP39905 EDA-201ENST00000338901 1233 ntBASIC17.81■□□□□ 0.44
GDNFP39905 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDNFP39905 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDNFP39905 AC087239.1-201ENST00000622671 572 ntBASIC17.81■□□□□ 0.44
GDNFP39905 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.81■□□□□ 0.44
GDNFP39905 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.81■□□□□ 0.44
GDNFP39905 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GDNFP39905 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDNFP39905 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDNFP39905 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
GDNFP39905 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GDNFP39905 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GDNFP39905 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.8■□□□□ 0.44
GDNFP39905 AC098818.2-201ENST00000564925 2320 ntBASIC17.8■□□□□ 0.44
GDNFP39905 AC126544.1-201ENST00000580842 1059 ntBASIC17.8■□□□□ 0.44
GDNFP39905 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.8■□□□□ 0.44
GDNFP39905 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GDNFP39905 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GDNFP39905 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDNFP39905 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GDNFP39905 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.79■□□□□ 0.44
GDNFP39905 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.79■□□□□ 0.44
GDNFP39905 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 MIR939-201ENST00000401314 82 ntBASIC17.79■□□□□ 0.44
GDNFP39905 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 AL355001.2-201ENST00000620617 1191 ntBASIC17.79■□□□□ 0.44
GDNFP39905 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GDNFP39905 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
GDNFP39905 AC116562.4-201ENST00000641316 2276 ntBASIC17.79■□□□□ 0.44
GDNFP39905 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GDNFP39905 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
GDNFP39905 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDNFP39905 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
GDNFP39905 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GDNFP39905 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.78■□□□□ 0.44
GDNFP39905 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
GDNFP39905 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms