Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 YPR203WYPR203W 309 nt2.57□□□□□ -2
VPS52P39904 YLR001CYLR001C 2589 nt2.57□□□□□ -2
VPS52P39904 ESL1YIL151C 3357 nt2.57□□□□□ -2
VPS52P39904 SOK1YDR006C 2706 nt2.57□□□□□ -2
VPS52P39904 RIX1YHR197W 2292 nt2.57□□□□□ -2
VPS52P39904 JSN1YJR091C 3276 nt2.57□□□□□ -2
VPS52P39904 UTP13YLR222C 2454 nt2.56□□□□□ -2
VPS52P39904 YDR250CYDR250C 276 nt2.56□□□□□ -2
VPS52P39904 YER006C-AYER006C-A 318 nt2.56□□□□□ -2
VPS52P39904 SMB1YER029C 591 nt2.56□□□□□ -2
VPS52P39904 IES5YER092W 378 nt2.56□□□□□ -2
VPS52P39904 RPL29YFR032C-A 180 nt2.56□□□□□ -2
VPS52P39904 HUR1YGL168W 333 nt2.56□□□□□ -2
VPS52P39904 YGR121W-AYGR121W-A 216 nt2.56□□□□□ -2
VPS52P39904 YHL046W-AYHL046W-A 327 nt2.56□□□□□ -2
VPS52P39904 LSM2YBL026W 288 nt2.56□□□□□ -2
VPS52P39904 YNL043CYNL043C 321 nt2.56□□□□□ -2
VPS52P39904 YHR078WYHR078W 1659 nt2.56□□□□□ -2
VPS52P39904 VPS64YDR200C 1815 nt2.56□□□□□ -2
VPS52P39904 CDC20YGL116W 1833 nt2.56□□□□□ -2
VPS52P39904 KIN82YCR091W 2163 nt2.56□□□□□ -2
VPS52P39904 snR70snR70 164 nt2.55□□□□□ -2
VPS52P39904 GYP7YDL234C 2241 nt2.55□□□□□ -2
VPS52P39904 ERG28YER044C 447 nt2.55□□□□□ -2
VPS52P39904 SAP1YER047C 2694 nt2.55□□□□□ -2
VPS52P39904 YER107W-AYER107W-A 321 nt2.55□□□□□ -2
VPS52P39904 RAD6YGL058W 519 nt2.55□□□□□ -2
VPS52P39904 PAU23YLR037C 375 nt2.55□□□□□ -2
VPS52P39904 YLR101CYLR101C 396 nt2.55□□□□□ -2
VPS52P39904 RMP1YLR145W 606 nt2.55□□□□□ -2
VPS52P39904 YML037CYML037C 1023 nt2.55□□□□□ -2
VPS52P39904 YPL039WYPL039W 951 nt2.55□□□□□ -2
VPS52P39904 YPR014CYPR014C 330 nt2.55□□□□□ -2
VPS52P39904 TCB2YNL087W 3537 nt2.54□□□□□ -2
VPS52P39904 MED1YPR070W 1701 nt2.54□□□□□ -2
VPS52P39904 VHR2YER064C 1518 nt2.54□□□□□ -2
VPS52P39904 BOI1YBL085W 2943 nt2.54□□□□□ -2
VPS52P39904 SPE1YKL184W 1401 nt2.54□□□□□ -2
VPS52P39904 GIM4YEL003W 336 nt2.54□□□□□ -2
VPS52P39904 YHR125WYHR125W 306 nt2.54□□□□□ -2
VPS52P39904 YPL261CYPL261C 309 nt2.54□□□□□ -2
VPS52P39904 MET6YER091C 2304 nt2.54□□□□□ -2
VPS52P39904 SNF12YNR023W 1701 nt2.54□□□□□ -2
VPS52P39904 YPP1YGR198W 2454 nt2.53□□□□□ -2
VPS52P39904 YGR067CYGR067C 2415 nt2.53□□□□□ -2
VPS52P39904 NAB6YML117W 3405 nt2.53□□□□□ -2
VPS52P39904 TIF35YDR429C 825 nt2.53□□□□□ -2
VPS52P39904 YPS5YGL259W 498 nt2.53□□□□□ -2
VPS52P39904 TCD1YHR003C 1290 nt2.53□□□□□ -2
VPS52P39904 NFU1YKL040C 771 nt2.53□□□□□ -2
VPS52P39904 TIF11YMR260C 462 nt2.53□□□□□ -2
VPS52P39904 LEE1YPL054W 906 nt2.53□□□□□ -2
VPS52P39904 SIP3YNL257C 3690 nt2.53□□□□□ -2.01
VPS52P39904 VPH2YKL119C 648 nt2.52□□□□□ -2.01
VPS52P39904 BET3YKR068C 582 nt2.52□□□□□ -2.01
VPS52P39904 ISU1YPL135W 498 nt2.52□□□□□ -2.01
VPS52P39904 YPL216WYPL216W 3309 nt2.52□□□□□ -2.01
VPS52P39904 SGS1YMR190C 4344 nt2.51□□□□□ -2.01
VPS52P39904 FKS3YMR306W 5358 nt2.51□□□□□ -2.01
VPS52P39904 SEN54YPL083C 1404 nt2.51□□□□□ -2.01
VPS52P39904 DNA2YHR164C 4569 nt2.51□□□□□ -2.01
VPS52P39904 POM152YMR129W 4014 nt2.51□□□□□ -2.01
VPS52P39904 NPR1YNL183C 2373 nt2.51□□□□□ -2.01
VPS52P39904 AI2Q0055 2565 nt2.51□□□□□ -2.01
VPS52P39904 YHR214C-CYHR214C-C 1437 nt2.51□□□□□ -2.01
VPS52P39904 DSE4YNR067C 3354 nt2.5□□□□□ -2.01
VPS52P39904 BUB1YGR188C 3066 nt2.5□□□□□ -2.01
VPS52P39904 CBS1YDL069C 690 nt2.5□□□□□ -2.01
VPS52P39904 YDR209CYDR209C 414 nt2.5□□□□□ -2.01
VPS52P39904 TSA2YDR453C 591 nt2.5□□□□□ -2.01
VPS52P39904 YER135CYER135C 393 nt2.5□□□□□ -2.01
VPS52P39904 RPS22AYJL190C 393 nt2.5□□□□□ -2.01
VPS52P39904 CMS1YLR003C 876 nt2.5□□□□□ -2.01
VPS52P39904 RPL20AYMR242C 519 nt2.5□□□□□ -2.01
VPS52P39904 CMC2YBL059C-A 330 nt2.5□□□□□ -2.01
VPS52P39904 NSL1YPL233W 651 nt2.5□□□□□ -2.01
VPS52P39904 YPL276WYPL276W 438 nt2.5□□□□□ -2.01
VPS52P39904 COG3YER157W 2406 nt2.49□□□□□ -2.01
VPS52P39904 PSY2YNL201C 2577 nt2.49□□□□□ -2.01
VPS52P39904 RNR4YGR180C 1038 nt2.49□□□□□ -2.01
VPS52P39904 LAG1YHL003C 1236 nt2.49□□□□□ -2.01
VPS52P39904 YHL006W-AYHL006W-A 354 nt2.49□□□□□ -2.01
VPS52P39904 NBL1YHR199C-A 222 nt2.49□□□□□ -2.01
VPS52P39904 YLR269CYLR269C 351 nt2.49□□□□□ -2.01
VPS52P39904 JIP3YLR331C 378 nt2.49□□□□□ -2.01
VPS52P39904 PEP12YOR036W 867 nt2.49□□□□□ -2.01
VPS52P39904 YPL197CYPL197C 414 nt2.49□□□□□ -2.01
VPS52P39904 MSS18YPR134W 807 nt2.49□□□□□ -2.01
VPS52P39904 PFF1YBR074W 2931 nt2.48□□□□□ -2.01
VPS52P39904 FUS1YCL027W 1539 nt2.48□□□□□ -2.01
VPS52P39904 SKT5YBL061C 2091 nt2.48□□□□□ -2.01
VPS52P39904 FLO11YIR019C 4104 nt2.48□□□□□ -2.01
VPS52P39904 YDR269CYDR269C 324 nt2.48□□□□□ -2.01
VPS52P39904 YDR524W-CYDR524W-C 90 nt2.48□□□□□ -2.01
VPS52P39904 IRC4YDR540C 540 nt2.48□□□□□ -2.01
VPS52P39904 YMR31YFR049W 372 nt2.48□□□□□ -2.01
VPS52P39904 tW(CCA)G1tW(CCA)G1 72 nt2.48□□□□□ -2.01
VPS52P39904 tW(CCA)G2tW(CCA)G2 72 nt2.48□□□□□ -2.01
VPS52P39904 tW(CCA)JtW(CCA)J 72 nt2.48□□□□□ -2.01
VPS52P39904 tW(CCA)KtW(CCA)K 72 nt2.48□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms