Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHAP31040 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHAP31040 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHAP31040 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHAP31040 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SDHAP31040 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAP31040 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SDHAP31040 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAP31040 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SDHAP31040 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAP31040 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SDHAP31040 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.36■□□□□ 0.53
SDHAP31040 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAP31040 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.36■□□□□ 0.53
SDHAP31040 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAP31040 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.35■□□□□ 0.53
SDHAP31040 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SDHAP31040 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAP31040 AL162377.1-201ENST00000618844 1793 ntBASIC18.35■□□□□ 0.53
SDHAP31040 AC092720.2-201ENST00000602388 1665 ntBASIC18.35■□□□□ 0.53
SDHAP31040 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.35■□□□□ 0.53
SDHAP31040 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 AC004854.2-201ENST00000608450 1441 ntBASIC18.35■□□□□ 0.53
SDHAP31040 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SDHAP31040 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.35■□□□□ 0.53
SDHAP31040 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.35■□□□□ 0.53
SDHAP31040 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 AL512408.1-201ENST00000569378 2000 ntBASIC18.35■□□□□ 0.53
SDHAP31040 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAP31040 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAP31040 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SDHAP31040 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SDHAP31040 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SDHAP31040 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.34■□□□□ 0.53
SDHAP31040 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.34■□□□□ 0.53
SDHAP31040 SLC7A5P1-201ENST00000568957 537 ntBASIC18.34■□□□□ 0.53
SDHAP31040 AC243732.1-201ENST00000612648 864 ntBASIC18.34■□□□□ 0.53
SDHAP31040 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SDHAP31040 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.34■□□□□ 0.53
SDHAP31040 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SDHAP31040 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAP31040 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAP31040 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.33■□□□□ 0.53
SDHAP31040 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SDHAP31040 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAP31040 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAP31040 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
SDHAP31040 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SDHAP31040 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAP31040 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SDHAP31040 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAP31040 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.33■□□□□ 0.52
SDHAP31040 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SDHAP31040 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAP31040 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.33■□□□□ 0.52
SDHAP31040 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SDHAP31040 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAP31040 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SDHAP31040 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAP31040 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.33■□□□□ 0.52
SDHAP31040 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAP31040 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAP31040 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.32■□□□□ 0.52
SDHAP31040 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHAP31040 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms