Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC1P29353 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.77■□□□□ 0.6
SHC1P29353 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHC1P29353 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHC1P29353 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHC1P29353 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
SHC1P29353 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC1P29353 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC1P29353 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC1P29353 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC1P29353 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SHC1P29353 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC1P29353 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC1P29353 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
SHC1P29353 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHC1P29353 AC073111.5-205ENST00000641717 521 ntBASIC18.76■□□□□ 0.59
SHC1P29353 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
SHC1P29353 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC1P29353 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC1P29353 FEM1AP1-201ENST00000431297 1995 ntBASIC18.75■□□□□ 0.59
SHC1P29353 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC1P29353 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC1P29353 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC1P29353 CDCA4P2-201ENST00000441182 718 ntBASIC18.75■□□□□ 0.59
SHC1P29353 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC1P29353 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SHC1P29353 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC1P29353 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC1P29353 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC1P29353 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.74■□□□□ 0.59
SHC1P29353 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SHC1P29353 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.74■□□□□ 0.59
SHC1P29353 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SHC1P29353 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.74■□□□□ 0.59
SHC1P29353 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.74■□□□□ 0.59
SHC1P29353 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.74■□□□□ 0.59
SHC1P29353 CNN2P6-201ENST00000439038 900 ntBASIC18.74■□□□□ 0.59
SHC1P29353 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 TERF1P5-201ENST00000477545 1207 ntBASIC18.74■□□□□ 0.59
SHC1P29353 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SHC1P29353 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SHC1P29353 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC1P29353 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHC1P29353 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.73■□□□□ 0.59
SHC1P29353 AC245052.3-201ENST00000450182 901 ntBASIC18.73■□□□□ 0.59
SHC1P29353 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.73■□□□□ 0.59
SHC1P29353 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.73■□□□□ 0.59
SHC1P29353 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.73■□□□□ 0.59
SHC1P29353 RAP2CP1-201ENST00000605103 478 ntBASIC18.73■□□□□ 0.59
SHC1P29353 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC1P29353 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC1P29353 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC1P29353 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SHC1P29353 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.72■□□□□ 0.59
SHC1P29353 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.72■□□□□ 0.59
SHC1P29353 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SHC1P29353 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.72■□□□□ 0.59
SHC1P29353 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 AL049796.1-201ENST00000565336 1766 ntBASIC18.72■□□□□ 0.59
SHC1P29353 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SHC1P29353 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SHC1P29353 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC1P29353 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms