Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 BI2Q0110 1272 nt2.98□□□□□ -1.93
MSH1P25846 YKL068W-AYKL068W-A 237 nt2.98□□□□□ -1.93
MSH1P25846 SWM2YNR004W 441 nt2.98□□□□□ -1.93
MSH1P25846 ESF2YNR054C 951 nt2.98□□□□□ -1.93
MSH1P25846 YPL080CYPL080C 327 nt2.98□□□□□ -1.93
MSH1P25846 YPR170W-AYPR170W-A 186 nt2.98□□□□□ -1.93
MSH1P25846 JSN1YJR091C 3276 nt2.98□□□□□ -1.93
MSH1P25846 MET6YER091C 2304 nt2.98□□□□□ -1.93
MSH1P25846 YER119C-AYER119C-A 372 nt2.97□□□□□ -1.93
MSH1P25846 CMS1YLR003C 876 nt2.97□□□□□ -1.93
MSH1P25846 YLR230WYLR230W 306 nt2.97□□□□□ -1.93
MSH1P25846 SKP2YNL311C 2292 nt2.96□□□□□ -1.93
MSH1P25846 PUF4YGL014W 2667 nt2.96□□□□□ -1.93
MSH1P25846 UTP13YLR222C 2454 nt2.96□□□□□ -1.94
MSH1P25846 YIL166CYIL166C 1629 nt2.96□□□□□ -1.94
MSH1P25846 ECM29YHL030W 5607 nt2.96□□□□□ -1.94
MSH1P25846 YNL034WYNL034W 1839 nt2.96□□□□□ -1.94
MSH1P25846 YDR114CYDR114C 303 nt2.95□□□□□ -1.94
MSH1P25846 NOP19YGR251W 591 nt2.95□□□□□ -1.94
MSH1P25846 BIG1YHR101C 1008 nt2.95□□□□□ -1.94
MSH1P25846 YJL127C-BYJL127C-B 159 nt2.95□□□□□ -1.94
MSH1P25846 RPL6AYML073C 531 nt2.95□□□□□ -1.94
MSH1P25846 IGO1YNL157W 507 nt2.95□□□□□ -1.94
MSH1P25846 RPB11YOL005C 363 nt2.95□□□□□ -1.94
MSH1P25846 IRC16YPR038W 360 nt2.95□□□□□ -1.94
MSH1P25846 DPB11YJL090C 2295 nt2.95□□□□□ -1.94
MSH1P25846 UBP15YMR304W 3693 nt2.95□□□□□ -1.94
MSH1P25846 SPE1YKL184W 1401 nt2.94□□□□□ -1.94
MSH1P25846 YDR209CYDR209C 414 nt2.94□□□□□ -1.94
MSH1P25846 YER189WYER189W 369 nt2.94□□□□□ -1.94
MSH1P25846 AGA2YGL032C 264 nt2.94□□□□□ -1.94
MSH1P25846 RPI1YIL119C 1224 nt2.94□□□□□ -1.94
MSH1P25846 RPL33AYPL143W 324 nt2.94□□□□□ -1.94
MSH1P25846 snR41snR41 95 nt2.94□□□□□ -1.94
MSH1P25846 YLR001CYLR001C 2589 nt2.94□□□□□ -1.94
MSH1P25846 DUG2YBR281C 2637 nt2.93□□□□□ -1.94
MSH1P25846 SSN2YDR443C 4263 nt2.93□□□□□ -1.94
MSH1P25846 HAA1YPR008W 2085 nt2.93□□□□□ -1.94
MSH1P25846 MDM32YOR147W 1869 nt2.93□□□□□ -1.94
MSH1P25846 JIP5YPR169W 1479 nt2.93□□□□□ -1.94
MSH1P25846 TPM2YIL138C 486 nt2.93□□□□□ -1.94
MSH1P25846 MBB1YJL199C 327 nt2.93□□□□□ -1.94
MSH1P25846 YAL026C-AYAL026C-A 438 nt2.93□□□□□ -1.94
MSH1P25846 ECM25YJL201W 1800 nt2.93□□□□□ -1.94
MSH1P25846 TLC1TLC1 1301 nt2.93□□□□□ -1.94
MSH1P25846 snR76snR76 109 nt2.92□□□□□ -1.94
MSH1P25846 ECL1YGR146C 636 nt2.92□□□□□ -1.94
MSH1P25846 YMR052C-AYMR052C-A 366 nt2.92□□□□□ -1.94
MSH1P25846 PKR1YMR123W 369 nt2.92□□□□□ -1.94
MSH1P25846 RGM1YMR182C 636 nt2.92□□□□□ -1.94
MSH1P25846 RPS12YOR369C 432 nt2.92□□□□□ -1.94
MSH1P25846 LEE1YPL054W 906 nt2.92□□□□□ -1.94
MSH1P25846 KEL2YGR238C 2649 nt2.92□□□□□ -1.94
MSH1P25846 GPI17YDR434W 1605 nt2.92□□□□□ -1.94
MSH1P25846 YDR098C-BYDR098C-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YDR210C-DYDR210C-D 5268 nt2.92□□□□□ -1.94
MSH1P25846 YDR316W-BYDR316W-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YDR365W-BYDR365W-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YER138CYER138C 5268 nt2.92□□□□□ -1.94
MSH1P25846 YER160CYER160C 5268 nt2.92□□□□□ -1.94
MSH1P25846 YGR038C-BYGR038C-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YGR161C-DYGR161C-D 5268 nt2.92□□□□□ -1.94
MSH1P25846 YJR027WYJR027W 5268 nt2.92□□□□□ -1.94
MSH1P25846 YLR157C-BYLR157C-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YML039WYML039W 5268 nt2.92□□□□□ -1.94
MSH1P25846 YML045WYML045W 5268 nt2.92□□□□□ -1.94
MSH1P25846 YMR050CYMR050C 5268 nt2.92□□□□□ -1.94
MSH1P25846 YOL103W-BYOL103W-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YBR012W-BYBR012W-B 5271 nt2.92□□□□□ -1.94
MSH1P25846 YOR142W-BYOR142W-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YPL257W-BYPL257W-B 5268 nt2.92□□□□□ -1.94
MSH1P25846 YPR158W-BYPR158W-B 5271 nt2.92□□□□□ -1.94
MSH1P25846 FIR1YER032W 2631 nt2.91□□□□□ -1.94
MSH1P25846 YME2YMR302C 2553 nt2.91□□□□□ -1.94
MSH1P25846 GLC7YER133W 939 nt2.91□□□□□ -1.94
MSH1P25846 YIL030W-AYIL030W-A 339 nt2.91□□□□□ -1.94
MSH1P25846 YJR023CYJR023C 402 nt2.91□□□□□ -1.94
MSH1P25846 NFU1YKL040C 771 nt2.91□□□□□ -1.94
MSH1P25846 COA4YLR218C 453 nt2.91□□□□□ -1.94
MSH1P25846 DDR48YMR173W 1293 nt2.91□□□□□ -1.94
MSH1P25846 FYV12YOR183W 390 nt2.91□□□□□ -1.94
MSH1P25846 YPL039WYPL039W 951 nt2.91□□□□□ -1.94
MSH1P25846 YHR214C-CYHR214C-C 1437 nt2.91□□□□□ -1.94
MSH1P25846 GCD10YNL062C 1437 nt2.91□□□□□ -1.94
MSH1P25846 NDD1YOR372C 1665 nt2.91□□□□□ -1.94
MSH1P25846 RSE1YML049C 4086 nt2.91□□□□□ -1.94
MSH1P25846 DNL4YOR005C 2835 nt2.91□□□□□ -1.94
MSH1P25846 MMS1YPR164W 4224 nt2.91□□□□□ -1.94
MSH1P25846 CYR1YJL005W 6081 nt2.9□□□□□ -1.94
MSH1P25846 YEL018C-AYEL018C-A 534 nt2.9□□□□□ -1.95
MSH1P25846 YPS5YGL259W 498 nt2.9□□□□□ -1.95
MSH1P25846 RTS3YGR161C 792 nt2.9□□□□□ -1.95
MSH1P25846 RNR4YGR180C 1038 nt2.9□□□□□ -1.95
MSH1P25846 PEP8YJL053W 1140 nt2.9□□□□□ -1.95
MSH1P25846 YKL063CYKL063C 504 nt2.9□□□□□ -1.95
MSH1P25846 YKR033CYKR033C 426 nt2.9□□□□□ -1.95
MSH1P25846 YPR203WYPR203W 309 nt2.9□□□□□ -1.95
MSH1P25846 ROY1YMR258C 1662 nt2.89□□□□□ -1.95
MSH1P25846 PSO2YMR137C 1986 nt2.89□□□□□ -1.95
MSH1P25846 ECM5YMR176W 4236 nt2.89□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms