Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACKR3P25106 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACKR3P25106 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.8■□□□□ 0.44
ACKR3P25106 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.79■□□□□ 0.44
ACKR3P25106 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.79■□□□□ 0.44
ACKR3P25106 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ACKR3P25106 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.79■□□□□ 0.44
ACKR3P25106 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.79■□□□□ 0.44
ACKR3P25106 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ACKR3P25106 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 AC245052.3-201ENST00000450182 901 ntBASIC17.79■□□□□ 0.44
ACKR3P25106 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.79■□□□□ 0.44
ACKR3P25106 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.79■□□□□ 0.44
ACKR3P25106 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.79■□□□□ 0.44
ACKR3P25106 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
ACKR3P25106 FP700111.2-201ENST00000619190 1892 ntBASIC17.79■□□□□ 0.44
ACKR3P25106 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.79■□□□□ 0.44
ACKR3P25106 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.79■□□□□ 0.44
ACKR3P25106 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACKR3P25106 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ACKR3P25106 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.78■□□□□ 0.44
ACKR3P25106 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.78■□□□□ 0.44
ACKR3P25106 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ACKR3P25106 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.78■□□□□ 0.44
ACKR3P25106 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.78■□□□□ 0.44
ACKR3P25106 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 AC027702.1-201ENST00000563810 1770 ntBASIC17.78■□□□□ 0.44
ACKR3P25106 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.78■□□□□ 0.44
ACKR3P25106 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACKR3P25106 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ACKR3P25106 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ACKR3P25106 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
ACKR3P25106 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
ACKR3P25106 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
ACKR3P25106 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACKR3P25106 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.77■□□□□ 0.44
ACKR3P25106 KRT18P20-201ENST00000548986 1279 ntBASIC17.77■□□□□ 0.44
ACKR3P25106 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.77■□□□□ 0.44
ACKR3P25106 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.77■□□□□ 0.44
ACKR3P25106 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.77■□□□□ 0.44
ACKR3P25106 GABARAPL3-202ENST00000624044 1851 ntBASIC17.77■□□□□ 0.43
ACKR3P25106 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
ACKR3P25106 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ACKR3P25106 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
ACKR3P25106 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ACKR3P25106 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ACKR3P25106 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ACKR3P25106 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.76■□□□□ 0.43
ACKR3P25106 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.76■□□□□ 0.43
ACKR3P25106 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.76■□□□□ 0.43
ACKR3P25106 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.76■□□□□ 0.43
ACKR3P25106 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.76■□□□□ 0.43
ACKR3P25106 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.76■□□□□ 0.43
ACKR3P25106 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.76■□□□□ 0.43
ACKR3P25106 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
ACKR3P25106 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACKR3P25106 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.75■□□□□ 0.43
ACKR3P25106 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACKR3P25106 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACKR3P25106 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACKR3P25106 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACKR3P25106 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ACKR3P25106 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACKR3P25106 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACKR3P25106 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.75■□□□□ 0.43
ACKR3P25106 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms