Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS4Y1P22090 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RPS4Y1P22090 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y1P22090 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 AC010536.3-201ENST00000620306 533 ntBASIC18.83■□□□□ 0.6
RPS4Y1P22090 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y1P22090 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y1P22090 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y1P22090 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.83■□□□□ 0.6
RPS4Y1P22090 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y1P22090 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 TERF1P5-201ENST00000477545 1207 ntBASIC18.82■□□□□ 0.6
RPS4Y1P22090 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RPS4Y1P22090 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y1P22090 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 KRT18P11-201ENST00000435214 1283 ntBASIC18.81■□□□□ 0.6
RPS4Y1P22090 CDV3P1-201ENST00000471403 739 ntBASIC18.81■□□□□ 0.6
RPS4Y1P22090 AC007322.4-201ENST00000509611 723 ntBASIC18.81■□□□□ 0.6
RPS4Y1P22090 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 RARRES2P6-201ENST00000567333 442 ntBASIC18.81■□□□□ 0.6
RPS4Y1P22090 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y1P22090 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.81■□□□□ 0.6
RPS4Y1P22090 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.8■□□□□ 0.6
RPS4Y1P22090 KRT8P36-201ENST00000489121 1440 ntBASIC18.8■□□□□ 0.6
RPS4Y1P22090 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y1P22090 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 AL162412.1-201ENST00000567129 965 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms