Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNA3P22001 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.43■■□□□ 1.66
KCNA3P22001 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNA3P22001 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.43■■□□□ 1.66
KCNA3P22001 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.43■■□□□ 1.66
KCNA3P22001 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.43■■□□□ 1.66
KCNA3P22001 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.43■■□□□ 1.66
KCNA3P22001 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNA3P22001 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNA3P22001 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.43■■□□□ 1.66
KCNA3P22001 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNA3P22001 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.42■■□□□ 1.66
KCNA3P22001 HTR7P1-201ENST00000538670 1336 ntBASIC25.42■■□□□ 1.66
KCNA3P22001 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.42■■□□□ 1.66
KCNA3P22001 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.42■■□□□ 1.66
KCNA3P22001 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.42■■□□□ 1.66
KCNA3P22001 FAM197Y1-201ENST00000421178 764 ntBASIC25.42■■□□□ 1.66
KCNA3P22001 RBM17P1-201ENST00000453646 1190 ntBASIC25.42■■□□□ 1.66
KCNA3P22001 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
KCNA3P22001 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.42■■□□□ 1.66
KCNA3P22001 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.42■■□□□ 1.66
KCNA3P22001 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNA3P22001 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNA3P22001 AC073508.3-201ENST00000619697 1419 ntBASIC25.42■■□□□ 1.66
KCNA3P22001 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.42■■□□□ 1.66
KCNA3P22001 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
KCNA3P22001 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KCNA3P22001 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNA3P22001 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNA3P22001 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNA3P22001 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNA3P22001 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNA3P22001 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
KCNA3P22001 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNA3P22001 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.41■■□□□ 1.66
KCNA3P22001 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNA3P22001 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.41■■□□□ 1.66
KCNA3P22001 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNA3P22001 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNA3P22001 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.41■■□□□ 1.66
KCNA3P22001 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNA3P22001 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
KCNA3P22001 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNA3P22001 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
KCNA3P22001 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNA3P22001 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNA3P22001 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNA3P22001 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNA3P22001 KRT18P57-201ENST00000443599 1254 ntBASIC25.4■■□□□ 1.66
KCNA3P22001 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.4■■□□□ 1.66
KCNA3P22001 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNA3P22001 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNA3P22001 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNA3P22001 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KCNA3P22001 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KCNA3P22001 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
KCNA3P22001 AC113347.1-201ENST00000413321 391 ntBASIC25.39■■□□□ 1.66
KCNA3P22001 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.39■■□□□ 1.66
KCNA3P22001 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KCNA3P22001 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KCNA3P22001 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.39■■□□□ 1.66
KCNA3P22001 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.39■■□□□ 1.66
KCNA3P22001 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.39■■□□□ 1.66
KCNA3P22001 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
KCNA3P22001 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KCNA3P22001 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.39■■□□□ 1.65
KCNA3P22001 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
KCNA3P22001 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.38■■□□□ 1.65
KCNA3P22001 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
KCNA3P22001 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
KCNA3P22001 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNA3P22001 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.38■■□□□ 1.65
KCNA3P22001 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNA3P22001 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNA3P22001 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.37■■□□□ 1.65
KCNA3P22001 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
KCNA3P22001 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
KCNA3P22001 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNA3P22001 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNA3P22001 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNA3P22001 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.37■■□□□ 1.65
KCNA3P22001 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.37■■□□□ 1.65
KCNA3P22001 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.37■■□□□ 1.65
KCNA3P22001 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
KCNA3P22001 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNA3P22001 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNA3P22001 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms