Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF1BP20333 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 SUDS3P1-201ENST00000505831 966 ntBASIC19.02■□□□□ 0.64
TNFRSF1BP20333 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TNFRSF1BP20333 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.02■□□□□ 0.63
TNFRSF1BP20333 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.02■□□□□ 0.63
TNFRSF1BP20333 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNFRSF1BP20333 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 AL354811.1-201ENST00000610286 706 ntBASIC19.01■□□□□ 0.63
TNFRSF1BP20333 RARRES2P11-201ENST00000635158 484 ntBASIC19.01■□□□□ 0.63
TNFRSF1BP20333 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF1BP20333 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF1BP20333 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF1BP20333 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1BP20333 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF1BP20333 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF1BP20333 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1BP20333 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1BP20333 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19■□□□□ 0.63
TNFRSF1BP20333 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19■□□□□ 0.63
TNFRSF1BP20333 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF1BP20333 AC079140.4-201ENST00000507448 529 ntBASIC19■□□□□ 0.63
TNFRSF1BP20333 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms