Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LAMP1P11279 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LAMP1P11279 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMP1P11279 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMP1P11279 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.43■□□□□ 0.7
LAMP1P11279 AC116050.2-201ENST00000612102 1779 ntBASIC19.43■□□□□ 0.7
LAMP1P11279 KRT18P20-201ENST00000548986 1279 ntBASIC19.43■□□□□ 0.7
LAMP1P11279 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.43■□□□□ 0.7
LAMP1P11279 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMP1P11279 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.43■□□□□ 0.7
LAMP1P11279 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LAMP1P11279 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
LAMP1P11279 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMP1P11279 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMP1P11279 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LAMP1P11279 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.43■□□□□ 0.7
LAMP1P11279 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LAMP1P11279 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
LAMP1P11279 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.42■□□□□ 0.7
LAMP1P11279 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
LAMP1P11279 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
LAMP1P11279 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.42■□□□□ 0.7
LAMP1P11279 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.42■□□□□ 0.7
LAMP1P11279 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LAMP1P11279 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LAMP1P11279 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 AC112907.3-201ENST00000577781 2400 ntBASIC19.42■□□□□ 0.7
LAMP1P11279 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LAMP1P11279 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LAMP1P11279 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMP1P11279 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LAMP1P11279 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 KRT18P61-201ENST00000585825 1298 ntBASIC19.41■□□□□ 0.7
LAMP1P11279 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
LAMP1P11279 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMP1P11279 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LAMP1P11279 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LAMP1P11279 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMP1P11279 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMP1P11279 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
LAMP1P11279 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
LAMP1P11279 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LAMP1P11279 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.4■□□□□ 0.7
LAMP1P11279 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
LAMP1P11279 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.4■□□□□ 0.7
LAMP1P11279 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMP1P11279 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMP1P11279 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMP1P11279 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.4■□□□□ 0.7
LAMP1P11279 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMP1P11279 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.4■□□□□ 0.7
LAMP1P11279 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LAMP1P11279 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms