Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.29■■□□□ 1.8
SNRPA1P09661 AC069544.1-201ENST00000609399 999 ntBASIC26.29■■□□□ 1.8
SNRPA1P09661 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.29■■□□□ 1.8
SNRPA1P09661 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
SNRPA1P09661 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.29■■□□□ 1.8
SNRPA1P09661 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.29■■□□□ 1.8
SNRPA1P09661 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.28■■□□□ 1.8
SNRPA1P09661 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.28■■□□□ 1.8
SNRPA1P09661 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.28■■□□□ 1.8
SNRPA1P09661 C1QBPP2-201ENST00000528754 825 ntBASIC26.28■■□□□ 1.8
SNRPA1P09661 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.28■■□□□ 1.8
SNRPA1P09661 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SNRPA1P09661 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.28■■□□□ 1.8
SNRPA1P09661 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.28■■□□□ 1.8
SNRPA1P09661 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.28■■□□□ 1.8
SNRPA1P09661 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNRPA1P09661 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SNRPA1P09661 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.28■■□□□ 1.8
SNRPA1P09661 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SNRPA1P09661 AC011484.1-201ENST00000377652 1995 ntBASIC26.27■■□□□ 1.8
SNRPA1P09661 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.27■■□□□ 1.8
SNRPA1P09661 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SNRPA1P09661 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 AL596275.1-201ENST00000423464 877 ntBASIC26.27■■□□□ 1.8
SNRPA1P09661 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.27■■□□□ 1.8
SNRPA1P09661 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRPA1P09661 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.26■■□□□ 1.79
SNRPA1P09661 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.26■■□□□ 1.79
SNRPA1P09661 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.26■■□□□ 1.79
SNRPA1P09661 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SNRPA1P09661 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.26■■□□□ 1.79
SNRPA1P09661 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 AC008550.1-201ENST00000511500 884 ntBASIC26.26■■□□□ 1.79
SNRPA1P09661 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.26■■□□□ 1.79
SNRPA1P09661 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.26■■□□□ 1.79
SNRPA1P09661 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNRPA1P09661 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRPA1P09661 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRPA1P09661 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SNRPA1P09661 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRPA1P09661 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SNRPA1P09661 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.25■■□□□ 1.79
SNRPA1P09661 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.25■■□□□ 1.79
SNRPA1P09661 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.25■■□□□ 1.79
SNRPA1P09661 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNRPA1P09661 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.25■■□□□ 1.79
SNRPA1P09661 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRPA1P09661 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.25■■□□□ 1.79
SNRPA1P09661 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.25■■□□□ 1.79
SNRPA1P09661 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SNRPA1P09661 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.24■■□□□ 1.79
SNRPA1P09661 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.24■■□□□ 1.79
SNRPA1P09661 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SNRPA1P09661 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
SNRPA1P09661 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 AC005829.2-201ENST00000571422 1056 ntBASIC26.24■■□□□ 1.79
SNRPA1P09661 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRPA1P09661 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.23■■□□□ 1.79
SNRPA1P09661 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.23■■□□□ 1.79
SNRPA1P09661 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.23■■□□□ 1.79
SNRPA1P09661 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.23■■□□□ 1.79
SNRPA1P09661 FAM197Y4-202ENST00000622692 608 ntBASIC26.23■■□□□ 1.79
SNRPA1P09661 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.23■■□□□ 1.79
SNRPA1P09661 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRPA1P09661 Z98882.1-201ENST00000622160 2253 ntBASIC26.23■■□□□ 1.79
SNRPA1P09661 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms