Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 SWM2YNR004W 441 nt3.24□□□□□ -1.89
CDC9P04819 TRM2YKR056W 1920 nt3.24□□□□□ -1.89
CDC9P04819 IKI3YLR384C 4050 nt3.24□□□□□ -1.89
CDC9P04819 SPC72YAL047C 1869 nt3.24□□□□□ -1.89
CDC9P04819 NTO1YPR031W 2247 nt3.23□□□□□ -1.89
CDC9P04819 VFA1YER128W 612 nt3.23□□□□□ -1.89
CDC9P04819 YER189WYER189W 369 nt3.23□□□□□ -1.89
CDC9P04819 tT(UGU)Q1tT(UGU)Q1 76 nt3.23□□□□□ -1.89
CDC9P04819 YLR154C-HYLR154C-H 132 nt3.23□□□□□ -1.89
CDC9P04819 YLR156C-AYLR156C-A 132 nt3.23□□□□□ -1.89
CDC9P04819 YLR157C-CYLR157C-C 132 nt3.23□□□□□ -1.89
CDC9P04819 YLR159C-AYLR159C-A 132 nt3.23□□□□□ -1.89
CDC9P04819 UNG1YML021C 1080 nt3.23□□□□□ -1.89
CDC9P04819 SHH3YMR118C 591 nt3.23□□□□□ -1.89
CDC9P04819 TIR2YOR010C 756 nt3.23□□□□□ -1.89
CDC9P04819 YOR146WYOR146W 306 nt3.23□□□□□ -1.89
CDC9P04819 BNA4YBL098W 1383 nt3.23□□□□□ -1.89
CDC9P04819 YAT2YER024W 2772 nt3.23□□□□□ -1.89
CDC9P04819 YDL180WYDL180W 1644 nt3.22□□□□□ -1.89
CDC9P04819 SOK1YDR006C 2706 nt3.22□□□□□ -1.89
CDC9P04819 AYT1YLL063C 1425 nt3.22□□□□□ -1.89
CDC9P04819 GPI8YDR331W 1236 nt3.22□□□□□ -1.89
CDC9P04819 SOD1YJR104C 465 nt3.22□□□□□ -1.89
CDC9P04819 RPL8BYLL045C 771 nt3.22□□□□□ -1.89
CDC9P04819 LCL2YLR104W 396 nt3.22□□□□□ -1.89
CDC9P04819 RPS28BYLR264W 204 nt3.22□□□□□ -1.89
CDC9P04819 IMP4YNL075W 873 nt3.22□□□□□ -1.89
CDC9P04819 YOR073W-AYOR073W-A 234 nt3.22□□□□□ -1.89
CDC9P04819 YOR199WYOR199W 330 nt3.22□□□□□ -1.89
CDC9P04819 YPL038W-AYPL038W-A 192 nt3.22□□□□□ -1.89
CDC9P04819 RDS1YCR106W 2499 nt3.22□□□□□ -1.89
CDC9P04819 BCH1YMR237W 2175 nt3.22□□□□□ -1.89
CDC9P04819 TSC11YER093C 4293 nt3.22□□□□□ -1.89
CDC9P04819 YIL166CYIL166C 1629 nt3.22□□□□□ -1.89
CDC9P04819 MTR4YJL050W 3222 nt3.21□□□□□ -1.89
CDC9P04819 ECM25YJL201W 1800 nt3.21□□□□□ -1.89
CDC9P04819 DUF1YOL087C 3351 nt3.21□□□□□ -1.9
CDC9P04819 MTC3YGL226W 372 nt3.21□□□□□ -1.9
CDC9P04819 BAT1YHR208W 1182 nt3.21□□□□□ -1.9
CDC9P04819 SNX41YDR425W 1878 nt3.21□□□□□ -1.9
CDC9P04819 ATG21YPL100W 1491 nt3.21□□□□□ -1.9
CDC9P04819 PSK2YOL045W 3306 nt3.21□□□□□ -1.9
CDC9P04819 YPR022CYPR022C 3402 nt3.21□□□□□ -1.9
CDC9P04819 ADK1YDR226W 669 nt3.2□□□□□ -1.9
CDC9P04819 YHR139C-AYHR139C-A 312 nt3.2□□□□□ -1.9
CDC9P04819 ARO1YDR127W 4767 nt3.2□□□□□ -1.9
CDC9P04819 MET5YJR137C 4329 nt3.2□□□□□ -1.9
CDC9P04819 SPT10YJL127C 1923 nt3.19□□□□□ -1.9
CDC9P04819 TIM11YDR322C-A 291 nt3.19□□□□□ -1.9
CDC9P04819 RPS1AYLR441C 768 nt3.19□□□□□ -1.9
CDC9P04819 RPS8AYBL072C 603 nt3.19□□□□□ -1.9
CDC9P04819 YOR105WYOR105W 327 nt3.19□□□□□ -1.9
CDC9P04819 YJL016WYJL016W 1686 nt3.19□□□□□ -1.9
CDC9P04819 DSE4YNR067C 3354 nt3.19□□□□□ -1.9
CDC9P04819 BRO1YPL084W 2535 nt3.19□□□□□ -1.9
CDC9P04819 BAS1YKR099W 2436 nt3.19□□□□□ -1.9
CDC9P04819 RMT2YDR465C 1239 nt3.18□□□□□ -1.9
CDC9P04819 SPT4YGR063C 309 nt3.18□□□□□ -1.9
CDC9P04819 YIL115W-AYIL115W-A 372 nt3.18□□□□□ -1.9
CDC9P04819 YPR108W-AYPR108W-A 213 nt3.18□□□□□ -1.9
CDC9P04819 YTA7YGR270W 4140 nt3.18□□□□□ -1.9
CDC9P04819 PFK26YIL107C 2484 nt3.17□□□□□ -1.9
CDC9P04819 YPK1YKL126W 2043 nt3.17□□□□□ -1.9
CDC9P04819 YDR464C-AYDR464C-A 189 nt3.17□□□□□ -1.9
CDC9P04819 RPL27BYDR471W 411 nt3.17□□□□□ -1.9
CDC9P04819 HYR1YIR037W 492 nt3.17□□□□□ -1.9
CDC9P04819 YML009C-AYML009C-A 327 nt3.17□□□□□ -1.9
CDC9P04819 NPR3YHL023C 3441 nt3.17□□□□□ -1.9
CDC9P04819 VAS1YGR094W 3315 nt3.17□□□□□ -1.9
CDC9P04819 SSE1YPL106C 2082 nt3.16□□□□□ -1.9
CDC9P04819 CGI121YML036W 546 nt3.16□□□□□ -1.9
CDC9P04819 YML099W-AYML099W-A 330 nt3.16□□□□□ -1.9
CDC9P04819 MGR1YCL044C 1254 nt3.16□□□□□ -1.9
CDC9P04819 GYP7YDL234C 2241 nt3.16□□□□□ -1.9
CDC9P04819 YJR003CYJR003C 1560 nt3.16□□□□□ -1.9
CDC9P04819 PSY2YNL201C 2577 nt3.15□□□□□ -1.9
CDC9P04819 STE6YKL209C 3873 nt3.15□□□□□ -1.9
CDC9P04819 FAP7YDL166C 594 nt3.15□□□□□ -1.91
CDC9P04819 YBR137WYBR137W 540 nt3.15□□□□□ -1.91
CDC9P04819 PKH1YDR490C 2301 nt3.15□□□□□ -1.91
CDC9P04819 JIP5YPR169W 1479 nt3.15□□□□□ -1.91
CDC9P04819 PUF4YGL014W 2667 nt3.15□□□□□ -1.91
CDC9P04819 AKR1YDR264C 2295 nt3.14□□□□□ -1.91
CDC9P04819 YJR098CYJR098C 1971 nt3.14□□□□□ -1.91
CDC9P04819 TPS2YDR074W 2691 nt3.14□□□□□ -1.91
CDC9P04819 YHR052W-AYHR052W-A 195 nt3.14□□□□□ -1.91
CDC9P04819 YHR054W-AYHR054W-A 195 nt3.14□□□□□ -1.91
CDC9P04819 URM1YIL008W 300 nt3.14□□□□□ -1.91
CDC9P04819 TMA19YKL056C 504 nt3.14□□□□□ -1.91
CDC9P04819 PRE8YML092C 753 nt3.14□□□□□ -1.91
CDC9P04819 VTI1YMR197C 654 nt3.14□□□□□ -1.91
CDC9P04819 YPL238CYPL238C 390 nt3.14□□□□□ -1.91
CDC9P04819 MAK21YDR060W 3078 nt3.13□□□□□ -1.91
CDC9P04819 NUP82YJL061W 2142 nt3.13□□□□□ -1.91
CDC9P04819 MDN1YLR106C 14733 nt3.13□□□□□ -1.91
CDC9P04819 AST2YER101C 1293 nt3.13□□□□□ -1.91
CDC9P04819 NCE101YJL205C 162 nt3.13□□□□□ -1.91
CDC9P04819 YKL033W-AYKL033W-A 711 nt3.13□□□□□ -1.91
CDC9P04819 YMR193C-AYMR193C-A 387 nt3.13□□□□□ -1.91
CDC9P04819 YPR016W-AYPR016W-A 261 nt3.13□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 46.6 ms