Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PGK1P00558 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PGK1P00558 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PGK1P00558 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.97■■□□□ 1.27
PGK1P00558 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.97■■□□□ 1.27
PGK1P00558 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.97■■□□□ 1.27
PGK1P00558 AC005829.2-201ENST00000571422 1056 ntBASIC22.97■■□□□ 1.27
PGK1P00558 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PGK1P00558 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.97■■□□□ 1.27
PGK1P00558 AC110285.5-201ENST00000611501 352 ntBASIC22.97■■□□□ 1.27
PGK1P00558 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.97■■□□□ 1.27
PGK1P00558 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PGK1P00558 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PGK1P00558 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PGK1P00558 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PGK1P00558 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.97■■□□□ 1.27
PGK1P00558 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.96■■□□□ 1.27
PGK1P00558 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PGK1P00558 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PGK1P00558 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PGK1P00558 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PGK1P00558 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PGK1P00558 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.96■■□□□ 1.27
PGK1P00558 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.96■■□□□ 1.27
PGK1P00558 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.96■■□□□ 1.27
PGK1P00558 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.96■■□□□ 1.27
PGK1P00558 AC133561.5-201ENST00000635547 218 ntBASIC22.96■■□□□ 1.27
PGK1P00558 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PGK1P00558 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.96■■□□□ 1.27
PGK1P00558 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.96■■□□□ 1.27
PGK1P00558 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PGK1P00558 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PGK1P00558 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PGK1P00558 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.95■■□□□ 1.26
PGK1P00558 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.95■■□□□ 1.26
PGK1P00558 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.95■■□□□ 1.26
PGK1P00558 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.95■■□□□ 1.26
PGK1P00558 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.95■■□□□ 1.26
PGK1P00558 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.95■■□□□ 1.26
PGK1P00558 AP001412.1-201ENST00000608405 714 ntBASIC22.95■■□□□ 1.26
PGK1P00558 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 AC113410.3-201ENST00000623366 203 ntBASIC22.95■■□□□ 1.26
PGK1P00558 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PGK1P00558 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PGK1P00558 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PGK1P00558 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PGK1P00558 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.94■■□□□ 1.26
PGK1P00558 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.94■■□□□ 1.26
PGK1P00558 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PGK1P00558 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
PGK1P00558 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PGK1P00558 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.94■■□□□ 1.26
PGK1P00558 AC087499.1-201ENST00000418141 1075 ntBASIC22.94■■□□□ 1.26
PGK1P00558 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.94■■□□□ 1.26
PGK1P00558 MIR4785-201ENST00000585005 73 ntBASIC22.94■■□□□ 1.26
PGK1P00558 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.94■■□□□ 1.26
PGK1P00558 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.94■■□□□ 1.26
PGK1P00558 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PGK1P00558 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PGK1P00558 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.93■■□□□ 1.26
PGK1P00558 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.93■■□□□ 1.26
PGK1P00558 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.93■■□□□ 1.26
PGK1P00558 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.93■■□□□ 1.26
PGK1P00558 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.93■■□□□ 1.26
PGK1P00558 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.93■■□□□ 1.26
PGK1P00558 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.93■■□□□ 1.26
PGK1P00558 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PGK1P00558 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.93■■□□□ 1.26
PGK1P00558 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.92■■□□□ 1.26
PGK1P00558 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PGK1P00558 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
PGK1P00558 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
PGK1P00558 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms