Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 AL121829.2-201ENST00000620908 328 ntBASIC23.65■■□□□ 1.38
ALDH1A1P00352 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ALDH1A1P00352 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 LINC01568-207ENST00000641790 1380 ntBASIC23.65■■□□□ 1.38
ALDH1A1P00352 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ALDH1A1P00352 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.64■■□□□ 1.38
ALDH1A1P00352 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ALDH1A1P00352 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ALDH1A1P00352 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
ALDH1A1P00352 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ALDH1A1P00352 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 KRT18P22-201ENST00000402024 1347 ntBASIC23.63■■□□□ 1.37
ALDH1A1P00352 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 AL137013.1-201ENST00000432946 1228 ntBASIC23.63■■□□□ 1.37
ALDH1A1P00352 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ALDH1A1P00352 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.63■■□□□ 1.37
ALDH1A1P00352 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ALDH1A1P00352 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
ALDH1A1P00352 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ALDH1A1P00352 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ALDH1A1P00352 NUDT16P1-203ENST00000513809 620 ntBASIC23.62■■□□□ 1.37
ALDH1A1P00352 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ALDH1A1P00352 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.62■■□□□ 1.37
ALDH1A1P00352 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 KRT18P57-201ENST00000443599 1254 ntBASIC23.61■■□□□ 1.37
ALDH1A1P00352 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 AL031963.3-201ENST00000606441 850 ntBASIC23.61■■□□□ 1.37
ALDH1A1P00352 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 AC079598.2-202ENST00000546624 1451 ntBASIC23.61■■□□□ 1.37
ALDH1A1P00352 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ALDH1A1P00352 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.61■■□□□ 1.37
ALDH1A1P00352 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ALDH1A1P00352 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms