Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
GGPS1O95749 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
GGPS1O95749 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
GGPS1O95749 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.11■■□□□ 1.29
GGPS1O95749 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.11■■□□□ 1.29
GGPS1O95749 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.11■■□□□ 1.29
GGPS1O95749 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.11■■□□□ 1.29
GGPS1O95749 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.11■■□□□ 1.29
GGPS1O95749 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
GGPS1O95749 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GGPS1O95749 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
GGPS1O95749 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.1■■□□□ 1.29
GGPS1O95749 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.1■■□□□ 1.29
GGPS1O95749 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.1■■□□□ 1.29
GGPS1O95749 PNMA6B-201ENST00000538162 1200 ntBASIC23.1■■□□□ 1.29
GGPS1O95749 AC008403.3-201ENST00000598924 454 ntBASIC23.1■■□□□ 1.29
GGPS1O95749 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.1■■□□□ 1.29
GGPS1O95749 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
GGPS1O95749 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
GGPS1O95749 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
GGPS1O95749 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.1■■□□□ 1.29
GGPS1O95749 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GGPS1O95749 AC092368.3-202ENST00000574180 1591 ntBASIC23.1■■□□□ 1.29
GGPS1O95749 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
GGPS1O95749 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.09■■□□□ 1.29
GGPS1O95749 AC087633.2-202ENST00000565166 1439 ntBASIC23.09■■□□□ 1.29
GGPS1O95749 AC244015.2-201ENST00000616358 1861 ntBASIC23.09■■□□□ 1.29
GGPS1O95749 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.09■■□□□ 1.29
GGPS1O95749 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.09■■□□□ 1.29
GGPS1O95749 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
GGPS1O95749 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GGPS1O95749 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.09■■□□□ 1.29
GGPS1O95749 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
GGPS1O95749 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.09■■□□□ 1.29
GGPS1O95749 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
GGPS1O95749 AC093827.2-201ENST00000512654 315 ntBASIC23.09■■□□□ 1.29
GGPS1O95749 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.09■■□□□ 1.29
GGPS1O95749 AC073648.6-201ENST00000641589 218 ntBASIC23.09■■□□□ 1.29
GGPS1O95749 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
GGPS1O95749 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GGPS1O95749 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.09■■□□□ 1.29
GGPS1O95749 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
GGPS1O95749 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
GGPS1O95749 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
GGPS1O95749 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
GGPS1O95749 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
GGPS1O95749 GCSHP5-201ENST00000443090 522 ntBASIC23.08■■□□□ 1.29
GGPS1O95749 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
GGPS1O95749 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.08■■□□□ 1.29
GGPS1O95749 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
GGPS1O95749 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
GGPS1O95749 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.08■■□□□ 1.29
GGPS1O95749 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.28
GGPS1O95749 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.08■■□□□ 1.28
GGPS1O95749 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
GGPS1O95749 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.07■■□□□ 1.28
GGPS1O95749 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.07■■□□□ 1.28
GGPS1O95749 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.07■■□□□ 1.28
GGPS1O95749 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
GGPS1O95749 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
GGPS1O95749 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.07■■□□□ 1.28
GGPS1O95749 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.07■■□□□ 1.28
GGPS1O95749 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
GGPS1O95749 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.07■■□□□ 1.28
GGPS1O95749 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.07■■□□□ 1.28
GGPS1O95749 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.07■■□□□ 1.28
GGPS1O95749 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
GGPS1O95749 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.06■■□□□ 1.28
GGPS1O95749 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
GGPS1O95749 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
GGPS1O95749 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.06■■□□□ 1.28
GGPS1O95749 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
GGPS1O95749 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.06■■□□□ 1.28
GGPS1O95749 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GGPS1O95749 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.06■■□□□ 1.28
GGPS1O95749 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
GGPS1O95749 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
GGPS1O95749 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.06■■□□□ 1.28
GGPS1O95749 FBXW4P1-201ENST00000426721 2239 ntBASIC23.06■■□□□ 1.28
GGPS1O95749 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.06■■□□□ 1.28
GGPS1O95749 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GGPS1O95749 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GGPS1O95749 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
GGPS1O95749 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.05■■□□□ 1.28
GGPS1O95749 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms