Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.36■□□□□ 0.53
UBL3O95164 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.36■□□□□ 0.53
UBL3O95164 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.36■□□□□ 0.53
UBL3O95164 AP005212.1-201ENST00000581547 1997 ntBASIC18.36■□□□□ 0.53
UBL3O95164 KRT18P61-201ENST00000585825 1298 ntBASIC18.36■□□□□ 0.53
UBL3O95164 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBL3O95164 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBL3O95164 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBL3O95164 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.35■□□□□ 0.53
UBL3O95164 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBL3O95164 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.35■□□□□ 0.53
UBL3O95164 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.35■□□□□ 0.53
UBL3O95164 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBL3O95164 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.35■□□□□ 0.53
UBL3O95164 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBL3O95164 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
UBL3O95164 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL3O95164 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL3O95164 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL3O95164 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBL3O95164 AC137761.2-201ENST00000561729 223 ntBASIC18.34■□□□□ 0.53
UBL3O95164 AC145350.3-201ENST00000569033 163 ntBASIC18.34■□□□□ 0.53
UBL3O95164 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
UBL3O95164 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UBL3O95164 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
UBL3O95164 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBL3O95164 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL3O95164 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL3O95164 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.33■□□□□ 0.53
UBL3O95164 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL3O95164 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL3O95164 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.33■□□□□ 0.53
UBL3O95164 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL3O95164 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
UBL3O95164 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.33■□□□□ 0.53
UBL3O95164 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.33■□□□□ 0.52
UBL3O95164 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
UBL3O95164 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.33■□□□□ 0.52
UBL3O95164 KRT18P11-201ENST00000435214 1283 ntBASIC18.33■□□□□ 0.52
UBL3O95164 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.33■□□□□ 0.52
UBL3O95164 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.33■□□□□ 0.52
UBL3O95164 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.33■□□□□ 0.52
UBL3O95164 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
UBL3O95164 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL3O95164 KRT16P2-201ENST00000414673 1423 ntBASIC18.32■□□□□ 0.52
UBL3O95164 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 AC016769.1-201ENST00000409132 1010 ntBASIC18.32■□□□□ 0.52
UBL3O95164 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.32■□□□□ 0.52
UBL3O95164 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.32■□□□□ 0.52
UBL3O95164 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UBL3O95164 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UBL3O95164 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL3O95164 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
UBL3O95164 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
UBL3O95164 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL3O95164 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL3O95164 AC061975.6-201ENST00000579045 1553 ntBASIC18.31■□□□□ 0.52
UBL3O95164 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
UBL3O95164 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.31■□□□□ 0.52
UBL3O95164 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBL3O95164 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL3O95164 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL3O95164 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL3O95164 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
UBL3O95164 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms