Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX2-2O95096 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX2-2O95096 AC016405.3-201ENST00000607710 860 ntBASIC18.97■□□□□ 0.63
NKX2-2O95096 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NKX2-2O95096 AC231657.2-201ENST00000624556 255 ntBASIC18.97■□□□□ 0.63
NKX2-2O95096 AC068338.2-201ENST00000563278 1430 ntBASIC18.97■□□□□ 0.63
NKX2-2O95096 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX2-2O95096 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX2-2O95096 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX2-2O95096 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX2-2O95096 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.97■□□□□ 0.63
NKX2-2O95096 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.97■□□□□ 0.63
NKX2-2O95096 AL121603.2-201ENST00000557373 2117 ntBASIC18.97■□□□□ 0.63
NKX2-2O95096 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-2O95096 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NKX2-2O95096 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NKX2-2O95096 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-2O95096 IKBKGP1-201ENST00000612193 1073 ntBASIC18.96■□□□□ 0.63
NKX2-2O95096 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-2O95096 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.96■□□□□ 0.63
NKX2-2O95096 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-2O95096 LINC01521-201ENST00000504184 1943 ntBASIC18.96■□□□□ 0.63
NKX2-2O95096 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX2-2O95096 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX2-2O95096 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX2-2O95096 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-2O95096 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.95■□□□□ 0.62
NKX2-2O95096 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-2O95096 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-2O95096 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
NKX2-2O95096 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NKX2-2O95096 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NKX2-2O95096 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-2O95096 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 AC007322.1-201ENST00000426983 750 ntBASIC18.94■□□□□ 0.62
NKX2-2O95096 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.94■□□□□ 0.62
NKX2-2O95096 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-2O95096 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-2O95096 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
NKX2-2O95096 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.94■□□□□ 0.62
NKX2-2O95096 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 LINC01006-201ENST00000333319 2292 ntBASIC18.94■□□□□ 0.62
NKX2-2O95096 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 AC020907.5-201ENST00000624372 1936 ntBASIC18.94■□□□□ 0.62
NKX2-2O95096 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-2O95096 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NKX2-2O95096 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.93■□□□□ 0.62
NKX2-2O95096 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.93■□□□□ 0.62
NKX2-2O95096 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX2-2O95096 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
NKX2-2O95096 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NKX2-2O95096 RARRES2P4-201ENST00000514074 484 ntBASIC18.93■□□□□ 0.62
NKX2-2O95096 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX2-2O95096 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.93■□□□□ 0.62
NKX2-2O95096 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX2-2O95096 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NKX2-2O95096 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NKX2-2O95096 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-2O95096 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms