Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX30O94993 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SOX30O94993 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
SOX30O94993 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 PGM5P4-201ENST00000421970 445 ntBASIC19.06■□□□□ 0.64
SOX30O94993 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.06■□□□□ 0.64
SOX30O94993 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 AC007322.4-201ENST00000509611 723 ntBASIC19.06■□□□□ 0.64
SOX30O94993 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX30O94993 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX30O94993 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SOX30O94993 KRT18P61-201ENST00000585825 1298 ntBASIC19.06■□□□□ 0.64
SOX30O94993 FAM21FP-204ENST00000608637 956 ntBASIC19.06■□□□□ 0.64
SOX30O94993 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX30O94993 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX30O94993 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX30O94993 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SOX30O94993 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX30O94993 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 AC137761.2-201ENST00000561729 223 ntBASIC19.05■□□□□ 0.64
SOX30O94993 AC145350.3-201ENST00000569033 163 ntBASIC19.05■□□□□ 0.64
SOX30O94993 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.05■□□□□ 0.64
SOX30O94993 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 AC010536.3-201ENST00000620306 533 ntBASIC19.05■□□□□ 0.64
SOX30O94993 AC013268.1-206ENST00000638368 961 ntBASIC19.05■□□□□ 0.64
SOX30O94993 AC112229.1-201ENST00000639295 961 ntBASIC19.05■□□□□ 0.64
SOX30O94993 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SOX30O94993 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX30O94993 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SOX30O94993 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SOX30O94993 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.04■□□□□ 0.64
SOX30O94993 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 LINC01521-201ENST00000504184 1943 ntBASIC19.04■□□□□ 0.64
SOX30O94993 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SOX30O94993 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.04■□□□□ 0.64
SOX30O94993 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 KRT18P5-201ENST00000436075 1291 ntBASIC19.04■□□□□ 0.64
SOX30O94993 GABARAPL3-202ENST00000624044 1851 ntBASIC19.04■□□□□ 0.64
SOX30O94993 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.04■□□□□ 0.64
SOX30O94993 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX30O94993 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.04■□□□□ 0.64
SOX30O94993 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 FEM1AP1-201ENST00000431297 1995 ntBASIC19.04■□□□□ 0.64
SOX30O94993 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.04■□□□□ 0.64
SOX30O94993 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.04■□□□□ 0.64
SOX30O94993 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX30O94993 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.03■□□□□ 0.64
SOX30O94993 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.03■□□□□ 0.64
SOX30O94993 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SOX30O94993 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SOX30O94993 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SOX30O94993 AC016769.1-201ENST00000409132 1010 ntBASIC19.03■□□□□ 0.64
SOX30O94993 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SOX30O94993 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
SOX30O94993 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.03■□□□□ 0.64
SOX30O94993 AC090192.1-201ENST00000517740 490 ntBASIC19.03■□□□□ 0.64
SOX30O94993 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.03■□□□□ 0.64
SOX30O94993 MIR2861-201ENST00000636310 90 ntBASIC19.03■□□□□ 0.64
SOX30O94993 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.03■□□□□ 0.64
SOX30O94993 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX30O94993 AC092667.1-201ENST00000434301 2586 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms