Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
BEST1O76090 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 AC091874.3-201ENST00000512672 1195 ntBASIC21.61■■□□□ 1.05
BEST1O76090 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.61■■□□□ 1.05
BEST1O76090 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.61■■□□□ 1.05
BEST1O76090 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
BEST1O76090 MYC-209ENST00000641252 345 ntBASIC21.61■■□□□ 1.05
BEST1O76090 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.61■■□□□ 1.05
BEST1O76090 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
BEST1O76090 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.6■■□□□ 1.05
BEST1O76090 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.6■■□□□ 1.05
BEST1O76090 AC083880.1-201ENST00000608266 535 ntBASIC21.6■■□□□ 1.05
BEST1O76090 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.6■■□□□ 1.05
BEST1O76090 AC087633.2-202ENST00000565166 1439 ntBASIC21.6■■□□□ 1.05
BEST1O76090 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.6■■□□□ 1.05
BEST1O76090 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.6■■□□□ 1.05
BEST1O76090 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST1O76090 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.59■■□□□ 1.05
BEST1O76090 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
BEST1O76090 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.59■■□□□ 1.05
BEST1O76090 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.59■■□□□ 1.05
BEST1O76090 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST1O76090 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BEST1O76090 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.58■■□□□ 1.05
BEST1O76090 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
BEST1O76090 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
BEST1O76090 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BEST1O76090 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
BEST1O76090 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.58■■□□□ 1.05
BEST1O76090 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.58■■□□□ 1.05
BEST1O76090 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.58■■□□□ 1.05
BEST1O76090 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BEST1O76090 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.58■■□□□ 1.04
BEST1O76090 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BEST1O76090 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
BEST1O76090 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BEST1O76090 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.58■■□□□ 1.04
BEST1O76090 CLDN5-201ENST00000403084 2357 ntBASIC21.58■■□□□ 1.04
BEST1O76090 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.57■■□□□ 1.04
BEST1O76090 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BEST1O76090 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BEST1O76090 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
BEST1O76090 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BEST1O76090 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BEST1O76090 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BEST1O76090 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.57■■□□□ 1.04
BEST1O76090 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.57■■□□□ 1.04
BEST1O76090 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.57■■□□□ 1.04
BEST1O76090 AL589743.5-201ENST00000616611 1050 ntBASIC21.57■■□□□ 1.04
BEST1O76090 AC105020.6-201ENST00000621523 1217 ntBASIC21.57■■□□□ 1.04
BEST1O76090 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.57■■□□□ 1.04
BEST1O76090 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.57■■□□□ 1.04
BEST1O76090 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BEST1O76090 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
BEST1O76090 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
BEST1O76090 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BEST1O76090 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BEST1O76090 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.56■■□□□ 1.04
BEST1O76090 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
BEST1O76090 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.56■■□□□ 1.04
BEST1O76090 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.56■■□□□ 1.04
BEST1O76090 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
BEST1O76090 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.56■■□□□ 1.04
BEST1O76090 KRT18P6-201ENST00000555540 1265 ntBASIC21.56■■□□□ 1.04
BEST1O76090 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.56■■□□□ 1.04
BEST1O76090 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms