Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PFDN1O60925 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.41■□□□□ 0.54
PFDN1O60925 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PFDN1O60925 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PFDN1O60925 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.41■□□□□ 0.54
PFDN1O60925 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
PFDN1O60925 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PFDN1O60925 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PFDN1O60925 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PFDN1O60925 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PFDN1O60925 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.4■□□□□ 0.54
PFDN1O60925 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PFDN1O60925 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.4■□□□□ 0.54
PFDN1O60925 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.4■□□□□ 0.54
PFDN1O60925 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
PFDN1O60925 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PFDN1O60925 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PFDN1O60925 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PFDN1O60925 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PFDN1O60925 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
PFDN1O60925 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PFDN1O60925 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PFDN1O60925 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PFDN1O60925 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PFDN1O60925 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
PFDN1O60925 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 AC099398.1-201ENST00000567919 2776 ntBASIC18.39■□□□□ 0.53
PFDN1O60925 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PFDN1O60925 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN1O60925 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN1O60925 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PFDN1O60925 AC005332.7-201ENST00000614046 2005 ntBASIC18.38■□□□□ 0.53
PFDN1O60925 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 AC139713.2-201ENST00000641328 2723 ntBASIC18.38■□□□□ 0.53
PFDN1O60925 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN1O60925 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN1O60925 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PFDN1O60925 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PFDN1O60925 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.38■□□□□ 0.53
PFDN1O60925 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.38■□□□□ 0.53
PFDN1O60925 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN1O60925 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN1O60925 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 AC099778.1-201ENST00000568593 1911 ntBASIC18.37■□□□□ 0.53
PFDN1O60925 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 MIR219A2-201ENST00000608502 1504 ntBASIC18.37■□□□□ 0.53
PFDN1O60925 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.37■□□□□ 0.53
PFDN1O60925 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.37■□□□□ 0.53
PFDN1O60925 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN1O60925 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.37■□□□□ 0.53
PFDN1O60925 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PFDN1O60925 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PFDN1O60925 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms