Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.65■□□□□ 0.74
LCMT2O60294 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LCMT2O60294 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.64■□□□□ 0.74
LCMT2O60294 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LCMT2O60294 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.64■□□□□ 0.73
LCMT2O60294 AC093787.1-201ENST00000450396 207 ntBASIC19.64■□□□□ 0.73
LCMT2O60294 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.64■□□□□ 0.73
LCMT2O60294 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.64■□□□□ 0.73
LCMT2O60294 AC069236.1-201ENST00000604339 616 ntBASIC19.64■□□□□ 0.73
LCMT2O60294 OR10C1-204ENST00000622521 1039 ntBASIC19.64■□□□□ 0.73
LCMT2O60294 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.64■□□□□ 0.73
LCMT2O60294 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.64■□□□□ 0.73
LCMT2O60294 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
LCMT2O60294 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LCMT2O60294 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCMT2O60294 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 FP700111.2-201ENST00000619190 1892 ntBASIC19.63■□□□□ 0.73
LCMT2O60294 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.63■□□□□ 0.73
LCMT2O60294 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 AC006970.2-201ENST00000450065 779 ntBASIC19.63■□□□□ 0.73
LCMT2O60294 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 AC133552.2-202ENST00000575694 574 ntBASIC19.63■□□□□ 0.73
LCMT2O60294 AC008694.1-202ENST00000636953 945 ntBASIC19.63■□□□□ 0.73
LCMT2O60294 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCMT2O60294 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
LCMT2O60294 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LCMT2O60294 AC007225.1-201ENST00000566331 1836 ntBASIC19.62■□□□□ 0.73
LCMT2O60294 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.62■□□□□ 0.73
LCMT2O60294 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LCMT2O60294 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.62■□□□□ 0.73
LCMT2O60294 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.62■□□□□ 0.73
LCMT2O60294 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.62■□□□□ 0.73
LCMT2O60294 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.62■□□□□ 0.73
LCMT2O60294 AC083906.2-201ENST00000511578 360 ntBASIC19.62■□□□□ 0.73
LCMT2O60294 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.62■□□□□ 0.73
LCMT2O60294 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
LCMT2O60294 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.62■□□□□ 0.73
LCMT2O60294 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.62■□□□□ 0.73
LCMT2O60294 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LCMT2O60294 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCMT2O60294 AL121603.2-201ENST00000557373 2117 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LCMT2O60294 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 AL512625.2-201ENST00000417533 625 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.61■□□□□ 0.73
LCMT2O60294 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.61■□□□□ 0.73
LCMT2O60294 AF201337.1-201ENST00000520239 748 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 AC105036.2-201ENST00000569468 176 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 MIR2861-201ENST00000636310 90 ntBASIC19.61■□□□□ 0.73
LCMT2O60294 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.61■□□□□ 0.73
LCMT2O60294 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LCMT2O60294 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.61■□□□□ 0.73
LCMT2O60294 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LCMT2O60294 CYP21A1P-202ENST00000354927 1481 ntBASIC19.6■□□□□ 0.73
LCMT2O60294 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 AC010980.2-201ENST00000587099 1412 ntBASIC19.6■□□□□ 0.73
LCMT2O60294 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCMT2O60294 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LCMT2O60294 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms