Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 AL162412.1-201ENST00000567129 965 ntBASIC18.29■□□□□ 0.52
TRAF3IP2O43734 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP2O43734 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 FAM21FP-204ENST00000608637 956 ntBASIC18.28■□□□□ 0.52
TRAF3IP2O43734 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 FP700111.2-201ENST00000619190 1892 ntBASIC18.28■□□□□ 0.52
TRAF3IP2O43734 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF3IP2O43734 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 AC016405.3-201ENST00000607710 860 ntBASIC18.27■□□□□ 0.52
TRAF3IP2O43734 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF3IP2O43734 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAF3IP2O43734 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRAF3IP2O43734 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TRAF3IP2O43734 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAF3IP2O43734 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAF3IP2O43734 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAF3IP2O43734 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 AC068338.2-201ENST00000563278 1430 ntBASIC18.26■□□□□ 0.51
TRAF3IP2O43734 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 AC231657.2-201ENST00000624556 255 ntBASIC18.26■□□□□ 0.51
TRAF3IP2O43734 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 AL157384.1-201ENST00000445995 2473 ntBASIC18.26■□□□□ 0.51
TRAF3IP2O43734 FEM1AP1-201ENST00000431297 1995 ntBASIC18.26■□□□□ 0.51
TRAF3IP2O43734 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF3IP2O43734 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms