Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA1O15239 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 SLC47A1P1-202ENST00000449666 945 ntBASIC14.01□□□□□ -0.17
NDUFA1O15239 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA1O15239 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 AC099778.1-201ENST00000568593 1911 ntBASIC14.01□□□□□ -0.17
NDUFA1O15239 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NDUFA1O15239 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA1O15239 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NDUFA1O15239 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NDUFA1O15239 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14□□□□□ -0.17
NDUFA1O15239 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14□□□□□ -0.17
NDUFA1O15239 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14□□□□□ -0.17
NDUFA1O15239 MIR4466-201ENST00000606121 54 ntBASIC14□□□□□ -0.17
NDUFA1O15239 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NDUFA1O15239 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA1O15239 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA1O15239 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NDUFA1O15239 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
NDUFA1O15239 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFA1O15239 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NDUFA1O15239 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA1O15239 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFA1O15239 AC131281.2-201ENST00000520478 145 ntBASIC13.99□□□□□ -0.17
NDUFA1O15239 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA1O15239 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFA1O15239 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFA1O15239 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA1O15239 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA1O15239 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA1O15239 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFA1O15239 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA1O15239 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFA1O15239 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA1O15239 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFA1O15239 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA1O15239 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFA1O15239 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFA1O15239 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA1O15239 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA1O15239 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms