Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3FO00303 LINC01521-201ENST00000504184 1943 ntBASIC20.08■□□□□ 0.8
EIF3FO00303 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
EIF3FO00303 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EIF3FO00303 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.07■□□□□ 0.8
EIF3FO00303 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.07■□□□□ 0.8
EIF3FO00303 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.07■□□□□ 0.8
EIF3FO00303 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
EIF3FO00303 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.07■□□□□ 0.8
EIF3FO00303 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.07■□□□□ 0.8
EIF3FO00303 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.07■□□□□ 0.8
EIF3FO00303 PGM5P4-201ENST00000421970 445 ntBASIC20.07■□□□□ 0.8
EIF3FO00303 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.07■□□□□ 0.8
EIF3FO00303 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.07■□□□□ 0.8
EIF3FO00303 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
EIF3FO00303 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
EIF3FO00303 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3FO00303 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
EIF3FO00303 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.06■□□□□ 0.8
EIF3FO00303 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EIF3FO00303 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.06■□□□□ 0.8
EIF3FO00303 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.06■□□□□ 0.8
EIF3FO00303 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 CNN2P6-201ENST00000439038 900 ntBASIC20.06■□□□□ 0.8
EIF3FO00303 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
EIF3FO00303 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.06■□□□□ 0.8
EIF3FO00303 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.06■□□□□ 0.8
EIF3FO00303 AC022517.1-201ENST00000592429 346 ntBASIC20.06■□□□□ 0.8
EIF3FO00303 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.06■□□□□ 0.8
EIF3FO00303 AC231657.2-201ENST00000624556 255 ntBASIC20.06■□□□□ 0.8
EIF3FO00303 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.06■□□□□ 0.8
EIF3FO00303 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
EIF3FO00303 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3FO00303 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
EIF3FO00303 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
EIF3FO00303 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.05■□□□□ 0.8
EIF3FO00303 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.05■□□□□ 0.8
EIF3FO00303 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 AC100791.3-201ENST00000617619 330 ntBASIC20.05■□□□□ 0.8
EIF3FO00303 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.05■□□□□ 0.8
EIF3FO00303 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3FO00303 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
EIF3FO00303 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.04■□□□□ 0.8
EIF3FO00303 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
EIF3FO00303 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EIF3FO00303 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.04■□□□□ 0.8
EIF3FO00303 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3FO00303 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.04■□□□□ 0.8
EIF3FO00303 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3FO00303 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3FO00303 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3FO00303 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.04■□□□□ 0.8
EIF3FO00303 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3FO00303 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
EIF3FO00303 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
EIF3FO00303 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3FO00303 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.04■□□□□ 0.8
EIF3FO00303 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms