Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
DDX39AO00148 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 KRT18P68-201ENST00000392293 1000 ntBASIC23.13■■□□□ 1.29
DDX39AO00148 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX39AO00148 AC097658.1-201ENST00000475555 843 ntBASIC23.13■■□□□ 1.29
DDX39AO00148 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX39AO00148 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX39AO00148 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX39AO00148 MIR4651-201ENST00000582622 73 ntBASIC23.13■■□□□ 1.29
DDX39AO00148 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX39AO00148 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
DDX39AO00148 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX39AO00148 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX39AO00148 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX39AO00148 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.12■■□□□ 1.29
DDX39AO00148 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
DDX39AO00148 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.12■■□□□ 1.29
DDX39AO00148 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX39AO00148 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
DDX39AO00148 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX39AO00148 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX39AO00148 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 MYC-209ENST00000641252 345 ntBASIC23.12■■□□□ 1.29
DDX39AO00148 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
DDX39AO00148 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX39AO00148 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX39AO00148 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX39AO00148 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
DDX39AO00148 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX39AO00148 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX39AO00148 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX39AO00148 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.11■■□□□ 1.29
DDX39AO00148 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DDX39AO00148 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.11■■□□□ 1.29
DDX39AO00148 AL589743.5-201ENST00000616611 1050 ntBASIC23.11■■□□□ 1.29
DDX39AO00148 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
DDX39AO00148 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX39AO00148 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.11■■□□□ 1.29
DDX39AO00148 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX39AO00148 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX39AO00148 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.1■■□□□ 1.29
DDX39AO00148 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
DDX39AO00148 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
DDX39AO00148 TSPY20P-201ENST00000450910 630 ntBASIC23.1■■□□□ 1.29
DDX39AO00148 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX39AO00148 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX39AO00148 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX39AO00148 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 AC011484.1-201ENST00000377652 1995 ntBASIC23.09■■□□□ 1.29
DDX39AO00148 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX39AO00148 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
DDX39AO00148 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX39AO00148 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.09■■□□□ 1.29
DDX39AO00148 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX39AO00148 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX39AO00148 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
DDX39AO00148 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX39AO00148 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX39AO00148 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX39AO00148 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX39AO00148 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
DDX39AO00148 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX39AO00148 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX39AO00148 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX39AO00148 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX39AO00148 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
DDX39AO00148 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.08■■□□□ 1.28
DDX39AO00148 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 AC005229.4-201ENST00000610085 2198 ntBASIC23.07■■□□□ 1.28
DDX39AO00148 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
DDX39AO00148 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 ABHD17AP1-201ENST00000358206 933 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms