Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCP4L1A6NKN8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCP4L1A6NKN8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 MST1L-201ENST00000442552 2185 ntBASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 CICP6-201ENST00000457191 2729 ntBASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PCP4L1A6NKN8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.16■□□□□ 0.18
PCP4L1A6NKN8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCP4L1A6NKN8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms