Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MEIS3P1A6NDR6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MEIS3P1A6NDR6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 AP005435.1-201ENST00000529293 1178 ntBASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 AC092171.4-201ENST00000609130 632 ntBASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MEIS3P1A6NDR6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MEIS3P1A6NDR6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MEIS3P1A6NDR6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MEIS3P1A6NDR6 AC098818.2-201ENST00000564925 2320 ntBASIC17.52■□□□□ 0.39
MEIS3P1A6NDR6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
MEIS3P1A6NDR6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.52■□□□□ 0.39
MEIS3P1A6NDR6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 SERBP1P1-201ENST00000396021 1160 ntBASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MEIS3P1A6NDR6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms