Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC28.08■■■□□ 2.09
SBNO1A3KN83 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC28.08■■■□□ 2.09
SBNO1A3KN83 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC28.08■■■□□ 2.09
SBNO1A3KN83 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC28.08■■■□□ 2.09
SBNO1A3KN83 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC28.08■■■□□ 2.09
SBNO1A3KN83 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC28.08■■■□□ 2.09
SBNO1A3KN83 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SBNO1A3KN83 AL353708.3-201ENST00000610272 989 ntBASIC28.08■■■□□ 2.09
SBNO1A3KN83 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SBNO1A3KN83 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC28.07■■■□□ 2.08
SBNO1A3KN83 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SBNO1A3KN83 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SBNO1A3KN83 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
SBNO1A3KN83 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SBNO1A3KN83 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SBNO1A3KN83 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC28.07■■■□□ 2.08
SBNO1A3KN83 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SBNO1A3KN83 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC28.07■■■□□ 2.08
SBNO1A3KN83 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SBNO1A3KN83 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SBNO1A3KN83 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 AL445228.2-201ENST00000605589 952 ntBASIC28.06■■■□□ 2.08
SBNO1A3KN83 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SBNO1A3KN83 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
SBNO1A3KN83 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SBNO1A3KN83 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
SBNO1A3KN83 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 CD177P1-201ENST00000606252 935 ntBASIC28.05■■■□□ 2.08
SBNO1A3KN83 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC28.05■■■□□ 2.08
SBNO1A3KN83 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SBNO1A3KN83 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SBNO1A3KN83 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SBNO1A3KN83 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SBNO1A3KN83 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC28.04■■■□□ 2.08
SBNO1A3KN83 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SBNO1A3KN83 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SBNO1A3KN83 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC28.04■■■□□ 2.08
SBNO1A3KN83 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC28.04■■■□□ 2.08
SBNO1A3KN83 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC28.04■■■□□ 2.08
SBNO1A3KN83 AC006557.6-201ENST00000623071 864 ntBASIC28.04■■■□□ 2.08
SBNO1A3KN83 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC28.04■■■□□ 2.08
SBNO1A3KN83 CABP2-204ENST00000636477 941 ntTSL 5 BASIC28.04■■■□□ 2.08
SBNO1A3KN83 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SBNO1A3KN83 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC28.03■■■□□ 2.08
SBNO1A3KN83 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC28.03■■■□□ 2.08
SBNO1A3KN83 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
SBNO1A3KN83 BRWD1-AS2-201ENST00000603064 1028 ntBASIC28.03■■■□□ 2.08
SBNO1A3KN83 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
SBNO1A3KN83 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SBNO1A3KN83 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.03■■■□□ 2.08
SBNO1A3KN83 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
SBNO1A3KN83 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SBNO1A3KN83 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SBNO1A3KN83 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
SBNO1A3KN83 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SBNO1A3KN83 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SBNO1A3KN83 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
SBNO1A3KN83 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
SBNO1A3KN83 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SBNO1A3KN83 RER1-204ENST00000378518 522 ntTSL 3 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SBNO1A3KN83 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC28.01■■■□□ 2.07
SBNO1A3KN83 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms