Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.66■■■□□ 2.34
CCDC144AA2RUR9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC144AA2RUR9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 BID-212ENST00000614949 1988 ntTSL 5 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 AL024507.2-201ENST00000606070 2574 ntBASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC144AA2RUR9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CCDC144AA2RUR9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC144AA2RUR9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 AL359736.2-201ENST00000621992 437 ntBASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC29.62■■■□□ 2.33
CCDC144AA2RUR9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 POM121L13P-201ENST00000422362 380 ntBASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC29.61■■■□□ 2.33
CCDC144AA2RUR9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 KRT17P3-201ENST00000420566 1262 ntBASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC29.6■■■□□ 2.33
CCDC144AA2RUR9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
CCDC144AA2RUR9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC144AA2RUR9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms