Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC163A0A0D9SF12 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC163A0A0D9SF12 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 AC026471.5-201ENST00000615068 467 ntBASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC163A0A0D9SF12 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 AL353708.3-201ENST00000610272 989 ntBASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 AL356652.1-201ENST00000615962 565 ntBASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC163A0A0D9SF12 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 AL353807.1-201ENST00000427475 662 ntBASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC163A0A0D9SF12 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 MMP23A-201ENST00000234610 1017 ntBASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 TMPOP1-202ENST00000424642 1267 ntBASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 AP003071.4-201ENST00000562276 1284 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms