Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SLC1A1P43005 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC122688.4-201ENST00000623279 4394 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SLC1A1P43005 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC013652.1-201ENST00000560197 1378 ntTSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 PRR15L-201ENST00000300557 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC245291.2-201ENST00000451224 1651 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 RFPL3-202ENST00000397468 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 AL031777.1-201ENST00000405418 499 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 GUSBP4-201ENST00000423899 672 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 AL390786.1-201ENST00000432108 309 ntTSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC114737.1-201ENST00000434531 453 ntTSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC008267.4-201ENST00000442005 521 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC073465.3-201ENST00000448468 405 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC005522.2-201ENST00000479299 453 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 RN7SL748P-201ENST00000483066 311 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 AC010368.1-201ENST00000510160 456 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 AC044836.1-201ENST00000519514 274 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 IL18-202ENST00000524595 1090 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 Metazoa_SRP.53-201ENST00000548393 281 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 BCO1-203ENST00000564552 949 ntTSL 2 BASIC9.53□□□□□ -0.88
SLC1A1P43005 GDPD1-206ENST00000581276 1055 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 PITPNC1-204ENST00000581322 1124 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 PHBP20-201ENST00000603694 818 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 AC068888.1-205ENST00000607643 662 ntTSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 AL109614.1-201ENST00000620327 419 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC9.53□□□□□ -0.88
SLC1A1P43005 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
SLC1A1P43005 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SLC1A1P43005 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC9.53□□□□□ -0.88
SLC1A1P43005 LIFR-AS1-202ENST00000500817 1342 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.53□□□□□ -0.88
SLC1A1P43005 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SLC1A1P43005 FMO8P-201ENST00000434461 1600 ntBASIC9.53□□□□□ -0.88
SLC1A1P43005 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC9.52□□□□□ -0.88
SLC1A1P43005 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC9.52□□□□□ -0.88
SLC1A1P43005 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SLC1A1P43005 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
SLC1A1P43005 PDCD10-208ENST00000473645 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SLC1A1P43005 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
SLC1A1P43005 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SLC1A1P43005 MYOCOS-204ENST00000637642 1549 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
SLC1A1P43005 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 AL022323.2-201ENST00000623239 3000 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 IDSP1-201ENST00000324799 376 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 BPNT1-202ENST00000354807 1152 ntTSL 5 BASIC9.52□□□□□ -0.89
SLC1A1P43005 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
SLC1A1P43005 RPL35-202ENST00000373570 493 ntTSL 3 BASIC9.52□□□□□ -0.89
SLC1A1P43005 FBXO47-201ENST00000378079 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 RN7SKP68-201ENST00000411055 307 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC9.52□□□□□ -0.89
SLC1A1P43005 AL356277.3-202ENST00000436672 587 ntTSL 3 BASIC9.52□□□□□ -0.89
SLC1A1P43005 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC9.52□□□□□ -0.89
SLC1A1P43005 PAICSP6-201ENST00000462572 1280 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 RPL12P6-201ENST00000495231 498 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SLC1A1P43005 AC090921.1-201ENST00000523703 1195 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 RAET1E-205ENST00000529948 875 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 OR7E4P-201ENST00000530317 1013 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 AC078776.1-201ENST00000546558 562 ntTSL 4 BASIC9.52□□□□□ -0.89
SLC1A1P43005 LINC02304-201ENST00000554445 445 ntTSL 3 BASIC9.52□□□□□ -0.89
SLC1A1P43005 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 AC024267.6-202ENST00000579187 1103 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 RN7SL615P-201ENST00000584065 298 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms