Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC117457.1-201ENST00000614557 1391 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 RPS12P16-201ENST00000399739 407 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 NFU1P1-201ENST00000413128 774 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 HCG24-202ENST00000414398 717 ntTSL 3 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 KRT18P49-201ENST00000427083 832 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 RPSAP27-201ENST00000442177 850 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC079322.1-201ENST00000568345 1135 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC093726.2-201ENST00000609134 679 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AL138999.1-201ENST00000612824 501 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 RBBP4P3-201ENST00000619705 1283 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AL158175.1-203ENST00000635654 1281 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AL356234.2-201ENST00000637996 1160 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 AC108120.3-201ENST00000505953 1510 ntBASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 PDHA2-201ENST00000295266 1456 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SYCE2Q6PIF2 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TIGIT-206ENST00000486257 3149 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC008507.5-201ENST00000624591 1969 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 LINC01426-202ENST00000420877 2632 ntTSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC084879.1-202ENST00000636927 2284 ntTSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 H3F3AP6-201ENST00000230495 411 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 H3F3AP4-201ENST00000369387 411 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TUBBP9-201ENST00000405234 1099 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AL135924.2-201ENST00000427901 361 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC009501.2-201ENST00000428700 312 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AL353072.1-201ENST00000446021 442 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 TARDBPP2-201ENST00000448913 1231 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 LINC01696-201ENST00000448988 492 ntTSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 PTPRE-207ENST00000471218 522 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 ATP6V1G1P2-201ENST00000522436 346 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AL352979.1-201ENST00000554238 297 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC005796.1-201ENST00000623214 433 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 GSN-AS1-201ENST00000414544 4763 ntBASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 NCF2-202ENST00000367536 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SYCE2Q6PIF2 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
SYCE2Q6PIF2 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms