Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC8.44□□□□□ -1.06
P04436 TRAM2-AS1-202ENST00000605910 1053 ntTSL 3 BASIC8.44□□□□□ -1.06
P04436 BX510359.8-201ENST00000617713 296 ntBASIC8.44□□□□□ -1.06
P04436 KRT18P59-202ENST00000534728 3338 ntTSL 2 BASIC8.44□□□□□ -1.06
P04436 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
P04436 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
P04436 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC8.44□□□□□ -1.06
P04436 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
P04436 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
P04436 AC138951.1-201ENST00000502532 2685 ntBASIC8.44□□□□□ -1.06
P04436 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC8.44□□□□□ -1.06
P04436 ARL6-202ENST00000394206 1590 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
P04436 AC005996.1-201ENST00000478788 1586 ntBASIC8.44□□□□□ -1.06
P04436 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
P04436 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
P04436 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.43□□□□□ -1.06
P04436 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC8.43□□□□□ -1.06
P04436 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC8.43□□□□□ -1.06
P04436 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 RCAN3-208ENST00000610732 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.43□□□□□ -1.06
P04436 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 AC073539.1-201ENST00000599810 2094 ntBASIC8.43□□□□□ -1.06
P04436 AL008721.2-201ENST00000609475 3754 ntBASIC8.43□□□□□ -1.06
P04436 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC8.43□□□□□ -1.06
P04436 SCIMP-201ENST00000399600 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 SNORD88A-201ENST00000408314 91 ntBASIC8.43□□□□□ -1.06
P04436 MED15P4-201ENST00000417579 393 ntBASIC8.43□□□□□ -1.06
P04436 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC8.43□□□□□ -1.06
P04436 AL445183.1-201ENST00000447867 467 ntTSL 2 BASIC8.43□□□□□ -1.06
P04436 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 CHCHD4P3-201ENST00000455954 410 ntBASIC8.43□□□□□ -1.06
P04436 AL078599.2-201ENST00000457116 471 ntTSL 3 BASIC8.43□□□□□ -1.06
P04436 AC139451.1-201ENST00000463176 330 ntBASIC8.43□□□□□ -1.06
P04436 AF131215.1-201ENST00000488887 520 ntBASIC8.43□□□□□ -1.06
P04436 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC8.43□□□□□ -1.06
P04436 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 AC017013.1-201ENST00000506459 799 ntBASIC8.43□□□□□ -1.06
P04436 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC8.43□□□□□ -1.06
P04436 AC114324.2-201ENST00000510435 680 ntTSL 3 BASIC8.43□□□□□ -1.06
P04436 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC8.43□□□□□ -1.06
P04436 RNU4ATAC12P-201ENST00000516460 113 ntBASIC8.43□□□□□ -1.06
P04436 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC8.43□□□□□ -1.06
P04436 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC8.43□□□□□ -1.06
P04436 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC8.43□□□□□ -1.06
P04436 FRG2GP-201ENST00000567870 615 ntBASIC8.43□□□□□ -1.06
P04436 AP001496.2-202ENST00000579933 977 ntTSL 5 BASIC8.43□□□□□ -1.06
P04436 AC004147.5-201ENST00000581727 536 ntBASIC8.43□□□□□ -1.06
P04436 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC8.43□□□□□ -1.06
P04436 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 AC108215.1-201ENST00000624463 3226 ntBASIC8.43□□□□□ -1.06
P04436 OR7E122P-202ENST00000641144 6171 ntBASIC8.43□□□□□ -1.06
P04436 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.43□□□□□ -1.06
P04436 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC8.43□□□□□ -1.06
P04436 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
P04436 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
P04436 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04436 AC020661.5-201ENST00000624853 1854 ntBASIC8.43□□□□□ -1.06
P04436 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 AC097534.2-203ENST00000609900 1921 ntBASIC8.42□□□□□ -1.06
P04436 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
P04436 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
P04436 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
P04436 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
P04436 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 NDST2-202ENST00000309979 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 DMP1-202ENST00000339673 2682 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
P04436 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 STSP1-201ENST00000412493 1151 ntBASIC8.42□□□□□ -1.06
P04436 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 RPL10P5-201ENST00000427719 639 ntBASIC8.42□□□□□ -1.06
P04436 AL358976.1-201ENST00000437555 392 ntBASIC8.42□□□□□ -1.06
P04436 AC010967.3-201ENST00000438648 213 ntBASIC8.42□□□□□ -1.06
P04436 LINC01718-201ENST00000441660 391 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.42□□□□□ -1.06
P04436 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 AC091152.1-201ENST00000472109 838 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms