Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CD48-202ENST00000368046 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 BPIFA1-203ENST00000375422 1063 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 OR52J3-201ENST00000380370 936 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 IGLV5-45-201ENST00000390296 397 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 IGLV3-19-201ENST00000390309 377 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC018638.1-201ENST00000414464 330 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 GZMB-204ENST00000415355 923 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 FYTTD1P1-201ENST00000424250 921 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 RPL3P12-201ENST00000436852 1208 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC026477.1-201ENST00000439391 616 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 BSN-AS1-201ENST00000442384 461 ntTSL 3 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 RPSAP18-201ENST00000453374 886 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AL135902.1-201ENST00000458017 384 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 COX17-206ENST00000497116 660 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC114744.1-201ENST00000498116 666 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 LINC02217-203ENST00000508677 296 ntTSL 3 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 MAFA-AS1-201ENST00000519762 417 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 SNRPCP17-201ENST00000520330 205 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 EIF1AD-202ENST00000525767 743 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 ATP5J2P5-201ENST00000537967 258 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC106788.1-202ENST00000548889 1212 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC120045.1-202ENST00000567770 1068 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC015688.1-201ENST00000584894 199 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC016590.1-202ENST00000586324 525 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 LINC01440-203ENST00000596828 1005 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC073254.1-210ENST00000597495 635 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AL355376.2-202ENST00000604686 241 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC244472.3-201ENST00000611520 428 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AL138995.1-201ENST00000614633 675 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC005703.5-201ENST00000623654 555 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 HSD17B2-201ENST00000199936 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC245060.6-201ENST00000624350 8420 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 RBMS3-209ENST00000452462 1547 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 IL7-202ENST00000379113 1888 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC092375.2-201ENST00000567370 1665 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC009021.2-201ENST00000567401 1666 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CRX-207ENST00000613299 4193 ntTSL 3 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 VTA1-201ENST00000367621 1284 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CYP4F62P-201ENST00000417310 524 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AP001885.1-202ENST00000444002 1255 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC016700.3-201ENST00000455541 448 ntTSL 3 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 PRR13P1-201ENST00000456678 408 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 LINC02142-201ENST00000500616 577 ntTSL 3 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC010768.3-201ENST00000525465 792 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC104758.5-201ENST00000569892 571 ntTSL 3 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC005670.1-201ENST00000572349 395 ntTSL 3 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CSAG4-202ENST00000583763 237 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 RPL7AP66-201ENST00000588490 801 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC068888.1-205ENST00000607643 662 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC011899.3-201ENST00000608596 617 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 Metazoa_SRP.142-201ENST00000612810 316 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 Metazoa_SRP.119-201ENST00000613387 291 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 GRXCR2-202ENST00000639411 837 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms