Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAPPC4Q9Y296 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAPPC4Q9Y296 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAPPC4Q9Y296 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 KRT18P61-201ENST00000585825 1298 ntBASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAPPC4Q9Y296 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAPPC4Q9Y296 KRT16P2-201ENST00000414673 1423 ntBASIC18.83■□□□□ 0.61
TRAPPC4Q9Y296 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
TRAPPC4Q9Y296 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAPPC4Q9Y296 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAPPC4Q9Y296 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAPPC4Q9Y296 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 AC061975.6-201ENST00000579045 1553 ntBASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAPPC4Q9Y296 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 SLC7A5P1-201ENST00000568957 537 ntBASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 GABARAPL3-202ENST00000624044 1851 ntBASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 AL020996.1-203ENST00000536896 2307 ntBASIC18.82■□□□□ 0.6
TRAPPC4Q9Y296 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 AL162430.1-201ENST00000480705 870 ntBASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC4Q9Y296 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC4Q9Y296 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms