Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 AC105020.6-201ENST00000621523 1217 ntBASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 AC093787.1-201ENST00000450396 207 ntBASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 RARRES2P4-201ENST00000514074 484 ntBASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN8AQ9UQD0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 AC083906.2-201ENST00000511578 360 ntBASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 AC073210.2-201ENST00000430369 194 ntBASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN8AQ9UQD0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 TMEM191A-211ENST00000637163 1067 ntBASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN8AQ9UQD0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 KRT17P1-201ENST00000399211 1546 ntBASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 TSPY20P-201ENST00000450910 630 ntBASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 CYP2T3P-201ENST00000601990 817 ntBASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN8AQ9UQD0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms