Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 RN7SL471P-201ENST00000580476 299 ntBASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SHANK2Q9UPX8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHANK2Q9UPX8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC30.83■■■□□ 2.53
SHANK2Q9UPX8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
SHANK2Q9UPX8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC30.82■■■□□ 2.53
SHANK2Q9UPX8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.53
SHANK2Q9UPX8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
SHANK2Q9UPX8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.82■■■□□ 2.53
SHANK2Q9UPX8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC30.82■■■□□ 2.53
SHANK2Q9UPX8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 GXYLT1P3-201ENST00000453058 1193 ntBASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 AC005829.2-201ENST00000571422 1056 ntBASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SHANK2Q9UPX8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
SHANK2Q9UPX8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
SHANK2Q9UPX8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 MIR4497-201ENST00000583208 89 ntBASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 FAM197Y4-202ENST00000622692 608 ntBASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SHANK2Q9UPX8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 MTDHP1-201ENST00000605323 784 ntBASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHANK2Q9UPX8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms