Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 AL162377.1-201ENST00000618844 1793 ntBASIC18.3■□□□□ 0.52
COPS3Q9UNS2 AC011484.1-201ENST00000377652 1995 ntBASIC18.3■□□□□ 0.52
COPS3Q9UNS2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 AP004607.4-201ENST00000530158 1459 ntBASIC18.29■□□□□ 0.52
COPS3Q9UNS2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 EDA-201ENST00000338901 1233 ntBASIC18.29■□□□□ 0.52
COPS3Q9UNS2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 AF213884.3-201ENST00000563833 479 ntBASIC18.29■□□□□ 0.52
COPS3Q9UNS2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 RASA4CP-201ENST00000424092 1398 ntBASIC18.29■□□□□ 0.52
COPS3Q9UNS2 AC008406.3-201ENST00000620001 1374 ntBASIC18.29■□□□□ 0.52
COPS3Q9UNS2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COPS3Q9UNS2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 MIR939-201ENST00000401314 82 ntBASIC18.28■□□□□ 0.52
COPS3Q9UNS2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.28■□□□□ 0.52
COPS3Q9UNS2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 AC012414.1-201ENST00000556676 535 ntBASIC18.27■□□□□ 0.52
COPS3Q9UNS2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPS3Q9UNS2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.27■□□□□ 0.51
COPS3Q9UNS2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPS3Q9UNS2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.27■□□□□ 0.51
COPS3Q9UNS2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
COPS3Q9UNS2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPS3Q9UNS2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.27■□□□□ 0.51
COPS3Q9UNS2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 TPRG1LP1-201ENST00000598702 760 ntBASIC18.26■□□□□ 0.51
COPS3Q9UNS2 AL031432.3-201ENST00000607698 485 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms